| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1789 |
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| Symbol | |
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| ID | 3716587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1991939 |
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| End bp | 1994323 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_347521 |
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| Protein GI | 77458016 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.993763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTGC ACCCCGTGCG CCCGAAGATA TTGGGTTTTA TCAGCGAAGA CGTCTCGGCC
TGGCTGGTCG GGGTGCTGGT ATTGCTCGCC GGCGGAATTC TTACGGGGCT GCTCGCCTGG
GGCACCCTCA ATCAGTTTCA CAGCCAGTTG CGCCAACGCT TTCAGCTGCT GGCCAACGAA
CGCTATAGCC GCATCGAAGA ACGATTTCAG GATCAGGAGC AACGTCTCGA TGGCCTGCGC
CGGTTCTTCG CCAACTCCGA ATCGGTGTCC CGCGCCGAAT TCGACGGTTA CACCCATCCT
CTATTGCTGC GCACCCAGGC TTATTCGTTT GCCTTGCGGG TGAGCGGTGC CGAACGTGCC
GCCTTCGAGC AGCGCGTGCG AGATGAGGGC CTGAGCACCT TCAGCGTGCG CGAACTCAAT
GCGCGCGGCG AACTGCAACT GGCCTCGGCC CGCGATGAAT ACGTGGTGGT GTTGTACAGC
CAGACCCAGA GCCGGCTCGG TTCTCCGCTG GGTTACGACT TGCTGGCTCA GCCGTTGCGC
CGCTCGACCC TGGAGCGCGC CGACCAGCTT CGCAGTCTGG CAGTGTCGCA GCCGATGCAT
CTGGTCGGTA TCGAGCCGGC ATACGCACGC GGCGTATTGC TGGTGGCACC TGTGTTACGC
GAAGGCGAGC CCAGATCATA CGGCTACGTG ATGGCTGTCA TCAGCATGCG TCAGCTGCTG
GCAGACGGCT TGCCGGATGC ATTTCATGAC TATCTGTCGG TGCGCATCCT CGATCTGTCC
ACCACTGATC AGCATGAAGT GCTGTTCGAA TCGACCAATG AACCGGCGCA GAGTGATCTG
TCGGCGACCC GGCTGGTGCG CATGGCCGAT CACGACTATC AGGTAGATAT CCTGCCCAGC
GAAGCGTTCA TGCAGGCCAA CCATTCGTCG GTGGGCAGCG TAGTGGTGCT GGGCGGGTTG
CTCAGTCTGC TGCTGAGCGC GCTGCTTTAT GTGCTGGTCA GCCAGCGCCA GCGTGCGTTG
CGCATGGTCG AGTTGCGCAC TCAGGAACTG CATGAGCGCG AGCAGGAACT GCGCGGCACC
CACGGTCAGT TGCGCGGGGT GCTCAACGCG GCGACCCAGG TTGCAATCAT CGCCACCGAC
CTGCGCGGAG TGATCAACAC TTTCAACCCC GGTGCCGAGC AGATGCTCGG TTATCACAGC
AACGAAGTGG TCGGCCACAT GACCCTGGAA AACCTGCACT TTCCCCGGGA ACTGGTGGCC
CGCGCGGCGG AACTCAGCGC CCGTTATGGC AAGGCCATTC CGACCTGTCA GGCGATGCTG
GTGGAGGGCG GCGAAGTCGG CGGGCACGAA GCGCGGGAAT GGACGCTGGT GCGCAAGGAT
GGCAGCCACC TGCCGGTGAA CATGTTGGCC ACCCCGGTGC TGGACGAACA AGGGCTGTGG
GTCGGCCATC TGGCGATCTG CATCGACATC ACCGAGCGCA AGCGCGTGCA TGAAGCCCTG
GCCGCGCGGG ACGTGCTGTT GAAGAAGCTC AGTGCCCACG TTCCCGGCGG GATCTATCAA
TTCAAAATGG AGTTCGACGG ACGCTTCAGC GTGATCTACG CCAGCGACGG TATCCGCGAG
ATCTATGAGC TGGAGCCGGA CGTGCTGTTG CTCAACGCCG AAGCGATCTT CACCCGCATC
CACCCGCAGG ATGTCAGCCG CGTGCGCAAG TCGATCCGTG CTTCGGCGGA CAATCTCAGC
CCATGGCGTG AGGAGTATCG TGTGCAATTG CCCGAGCGTG GCCTGCGCTG GGTTCGCGGC
GAGGCGACGC CGGAGGAACT GCCGGGCGGC GGGGTGCTGT GGCATGGCTA TATTTCGGAT
ATTTCCGACC TGAAACGGGT GGAAGAAGAG CTGCGCGCGC TGTCGGTGAC CGATTCGCTG
ACCGGGATTC ACAACCGGCG CTATTTCCAG GAGCGCCTGA CCACCGAAAT GGCCCGGGTC
GAGCGCGGCG GAGGCGAGTT GTCGGTGATC ATGCTCGACA TCGACCACTT CAAGCGGATC
AACGATCAGT ACGGTCACGC GGTAGGTGAC CGCGTGTTGC AGGCGGTCTG CGAGCGCATC
GGCCATCGTC TGCGGCGTAC CGACGTATTC TGCCGCTTGG GTGGCGAAGA GTTCATGGTG
CTGTGCCCGG ACATCGACGG CGATCACGCC CACATGCTGG CCGAAGAGTT ATGGCACAGC
CTGCGCAGTG CACCGATCGA CGTGGTGGGG GTGGTGACGG CCAGTTTCGG GATTGCCAGC
TGGCGACCGG GAGAGGGCGC GGATGCGCTG TTGCTGCGGG CGGATTCCGG GGTGTATGCG
GCGAAGCAGG GCGGACGGGA TCGGGTCGAG CGGCATATGA ACTGA
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| Protein sequence | MSLHPVRPKI LGFISEDVSA WLVGVLVLLA GGILTGLLAW GTLNQFHSQL RQRFQLLANE
RYSRIEERFQ DQEQRLDGLR RFFANSESVS RAEFDGYTHP LLLRTQAYSF ALRVSGAERA
AFEQRVRDEG LSTFSVRELN ARGELQLASA RDEYVVVLYS QTQSRLGSPL GYDLLAQPLR
RSTLERADQL RSLAVSQPMH LVGIEPAYAR GVLLVAPVLR EGEPRSYGYV MAVISMRQLL
ADGLPDAFHD YLSVRILDLS TTDQHEVLFE STNEPAQSDL SATRLVRMAD HDYQVDILPS
EAFMQANHSS VGSVVVLGGL LSLLLSALLY VLVSQRQRAL RMVELRTQEL HEREQELRGT
HGQLRGVLNA ATQVAIIATD LRGVINTFNP GAEQMLGYHS NEVVGHMTLE NLHFPRELVA
RAAELSARYG KAIPTCQAML VEGGEVGGHE AREWTLVRKD GSHLPVNMLA TPVLDEQGLW
VGHLAICIDI TERKRVHEAL AARDVLLKKL SAHVPGGIYQ FKMEFDGRFS VIYASDGIRE
IYELEPDVLL LNAEAIFTRI HPQDVSRVRK SIRASADNLS PWREEYRVQL PERGLRWVRG
EATPEELPGG GVLWHGYISD ISDLKRVEEE LRALSVTDSL TGIHNRRYFQ ERLTTEMARV
ERGGGELSVI MLDIDHFKRI NDQYGHAVGD RVLQAVCERI GHRLRRTDVF CRLGGEEFMV
LCPDIDGDHA HMLAEELWHS LRSAPIDVVG VVTASFGIAS WRPGEGADAL LLRADSGVYA
AKQGGRDRVE RHMN
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