Gene Pfl01_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1626 
Symbol 
ID3716838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1817313 
End bp1818041 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID 
Productdienelactone hydrolase 
Protein accessionYP_347358 
Protein GI77457853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0197057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG TCACTGTACG TTCCGTGGTC TATCAGATTG ACGGCCAGCC TTATGAAGGT 
CGCCTGGCAT TTGACGCCGA GCACAAGGGC GCGTGTCCGG GCCTGCTGAT GGCGCCGAAC
TGGATGGGTG TCAGCGCTGG CGCTGAAGAG ATCGCCAAAT CGGTGGCGGC CAAGGGTTAT
GTGGTGCTGA TCGCTGACGT ATACGGCCAG GCCGTGCGTC CGCAGAACGC TGATGAGGCC
GGTGCGGCGA TGATGCCACT GAAGAATGAT CGTGCGCTGC TGCGCAAGCG TATGCAGGCC
GCATTCGAAC AATTGCAGAA GCAGGGCGAC GCGTCGGTCG ATACCTCGAA ACTGGCGGTG
TTCGGTTTCT GCTTCGGCGG CTGCTGTGCG CTGGATCTGG CTCGCACCGG TGCCTCGGTG
AAAGCGGCAG TGTCGTTCCA CGGCACCCTG GATTCGCCGA ATCCGGCGGA CGCCAAGAAC
ATCAAGGGCT CGGTGCTGGT GCTGCACGGT GCTTCCGATC CGCTGGTGCC GAAAGAGCAG
TTGCCGGCAT TCGAAGACGA GATGAACGCT GCTGGTGTGG ACTGGCAGTT GCTGAGCTAC
GGCGGCGCGG TGCACTCGTT CACCGATCCG CACGCCAATG TGCCGGGCAA GATGATGTAC
GACGCGAAGA CCGCAGCGCG TGCGTTCAAG TCGATGCATG ATTTGCTGGA AGAAGTGTTC
AAGGGCTGA
 
Protein sequence
MSQVTVRSVV YQIDGQPYEG RLAFDAEHKG ACPGLLMAPN WMGVSAGAEE IAKSVAAKGY 
VVLIADVYGQ AVRPQNADEA GAAMMPLKND RALLRKRMQA AFEQLQKQGD ASVDTSKLAV
FGFCFGGCCA LDLARTGASV KAAVSFHGTL DSPNPADAKN IKGSVLVLHG ASDPLVPKEQ
LPAFEDEMNA AGVDWQLLSY GGAVHSFTDP HANVPGKMMY DAKTAARAFK SMHDLLEEVF
KG