Gene Pfl01_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1257 
Symbol 
ID3717411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1431583 
End bp1432794 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID 
Productaromatic amino acid beta-eliminating lyase/threonine aldolase 
Protein accessionYP_346989 
Protein GI77457484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATCG ATGACCTCTC GCGTCTGCGC GCAGCCACAC CCGGCTGCGC TCAGGTGGTC 
CACTTCAACC ACGCCGGCGC TTCGTTGCCG AGTCAGGCCA CCCTCGACGC GGTGATCGAA
CAGTTGCAAC GCGAAGCGCT CGGCGGGCCG ATGGAAGCGG CGGACAACCG GGTACAGGCA
CGCGCGCGCA ACGCGGCCGC CGCCCTGCTC AACGCCCAGC CCGAGGACAT TGCCTTCGCC
AGCAGCGGCT CAGCGGCCTG GAGTCAGGCG TTCAACGCAC TGGGGCCGTG GCAACCAGGC
GAGCGGATTC TGGTGGGTCG CCATGAATGG GCCGGCAATC TGGCGTGCAT GGCCGAAGCG
GTGAAGGCCG GCGCGCGGCT CGAAGTGATT CCTTGTGACG CCCACGGGGC AGTCGACCCG
CAAGCCCTGG CGCAGATGAT CGACAGCCAG GTGCGGCTGA TTGCCCTGAC CTGGCTGCCG
GCCAACGGCG GCCTGATCAA TCCCGCCGCG CAGATCGGCA ATGTCGCGCG GCGTCACGGC
ATCCCTTATT TCATCGATGC CGGTCAGGCG CTGGGGCAGT TGCCTTGCGA TGTTCAAGAC
CTGCAGTGCG ACGTGCTCAA GGGTGCCGGA CGCAAGTTCC TGCGCGGGCC TCGCGGCACG
GCGTTGATGT ACATCCGGGC GCAATTTCTG CAACGACTGC TCCCCGTGCA ACGCGATGTA
TTGTCGGCGC CCTGGGACGG CAAGCGCTTT ACCCTGCGTG ACGACGCCCG CCGCTTTGAA
ACCAGTGAAG TGTCGCTGGC GCTGCTGGCC GGGCTGGCCA ATGCGCTGGA GGAGCACAAT
CGCCTCGGCG CGTTCGCGAT CCGCCAACGC ATCGCACACC TGAGCAATGG ACTGCGGCAA
CGCCTGAAGG CGATTCCCGG CCTGACGCTG CGGAATCTTG GCGCGGCCAA TCAACAATCC
GGGCTGATCG CCTTCACGCT CGAAGGCTGG GACAGCGTGG CGCTGAAGCA GACGCTGGCC
GAACGGCGAA TCAACATCGG CGCCAATGGC GTGGCCTACA CGCCGCTGGA CATGCAGGCG
CGCGGGCTGA CGAATATTGC GCGGGTGGCG TTGAGCTACT TGAACACAGA AGAAGAGATC
GACGTGCTGC TGGAAAACCT GACGGAACTG GCCGCCCGGC CTCAGATCTC GATATCGACC
CAAAGCCCCT GA
 
Protein sequence
MNIDDLSRLR AATPGCAQVV HFNHAGASLP SQATLDAVIE QLQREALGGP MEAADNRVQA 
RARNAAAALL NAQPEDIAFA SSGSAAWSQA FNALGPWQPG ERILVGRHEW AGNLACMAEA
VKAGARLEVI PCDAHGAVDP QALAQMIDSQ VRLIALTWLP ANGGLINPAA QIGNVARRHG
IPYFIDAGQA LGQLPCDVQD LQCDVLKGAG RKFLRGPRGT ALMYIRAQFL QRLLPVQRDV
LSAPWDGKRF TLRDDARRFE TSEVSLALLA GLANALEEHN RLGAFAIRQR IAHLSNGLRQ
RLKAIPGLTL RNLGAANQQS GLIAFTLEGW DSVALKQTLA ERRINIGANG VAYTPLDMQA
RGLTNIARVA LSYLNTEEEI DVLLENLTEL AARPQISIST QSP