Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0800 |
Symbol | |
ID | 3715417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 943875 |
End bp | 944633 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Sel1 repeat-containing protein |
Protein accession | YP_346532 |
Protein GI | 77457027 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.414864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGACT TTCGGTTGCG TCGCGAAGAA GTCCTCGACG GCGAACGCCT CACGGCCATG CTCGAAGAAA GTCCTGCCCG CGCGGCTCAG GCAATTCTGC TGGCGGCGGG TGACGGCGTG CTGGAGGCGC AGGCGCTGCT CGGGCAGATC CTGCTCGATG GCCACGGGAT TGCTCAGGAT CAGCCGTTGG CATTGCGCTG GTTTGAGATT GCTGCAGGGC AAGGTCATCT GATGGCGCGC AACATGCTCG GTCGCTGCCA TGAACACGGA TGGGGTTGTG TGGCGGACGC AGCAGTTGCC GCCAGGCATT ATCGCGTTGC AGCAGATGAA GGGCTGGATT GGGCGATGTA CAACTTCGCC AATCTGCTCG CAACCGGACG CGGTGTAGCG GTCGATCATC TTCAGGCCAT GGCGTTGTAT CAACGCGCTG CCGAGGCCGG TCATGCCAAG TCGATGAACT TGCTCGGGCG TTATCTGGAG GAAGGGCAAG TGTGCCCGTC GGATCCGGCA GCGGCCCGTG ACTGGTATCG ACGTTCGGCC GAAGGCGGAG ACTTTCGCGG GCAGTTCAGC CACGCGGCAG TACTGGCGGC GGAGGGGCGC GTTGATGATG CGTTGGTCTG GCTGGAGAAA GCGCTGACCG GCGGCAACCT GAACTTCCTG CGAGTGGCCA GCCAGACGTT GGCAAGCGCA ACCGATCCGC GAATCCAGGC ACTGGCGCAG GCCTACGCTC GTCGTTGCGC CGAGTTACAG AACACCTGA
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Protein sequence | MADFRLRREE VLDGERLTAM LEESPARAAQ AILLAAGDGV LEAQALLGQI LLDGHGIAQD QPLALRWFEI AAGQGHLMAR NMLGRCHEHG WGCVADAAVA ARHYRVAADE GLDWAMYNFA NLLATGRGVA VDHLQAMALY QRAAEAGHAK SMNLLGRYLE EGQVCPSDPA AARDWYRRSA EGGDFRGQFS HAAVLAAEGR VDDALVWLEK ALTGGNLNFL RVASQTLASA TDPRIQALAQ AYARRCAELQ NT
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