| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0134 |
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| Symbol | |
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| ID | 3717877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 161000 |
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| End bp | 162352 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_345867 |
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| Protein GI | 77456362 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.675891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCGC ACCTGTTCAA GGCTCTACCC TTCGCTCTCG CCGCGTCTTT CGTACAAGCA
CAATCCTTAC CAGAAGCCAT GCAGCAGGCG CTGGATGTCC ATCCGGAAAT CCAGGCAGGG
GTCAACAGCC GACTGGCCGC GGATTATCAG TTAAAGGCTG CAAAAGGTGG ATACCTGCCC
AAGGTCGATC TGCTGGGCGG TTATGGCCGT GAAGGCACCG ACAGCGTCAC CACCCGCGCC
AATGGTGGCG GCAATCACTG GGAAACCCTG AACCGCAGCG AGTCAAGTTT GCGTCTGTCG
CAAATGGTTT TTGACGGTTT TGCGACGTCC AGCGAAGTCG GGCGTCAACA AGCCACCGTC
AACTCCCGCG CCTATTCCTT GCTCGGCACT TCCGAACGCA CCGCGCTGAC CGTGGCCCAG
GTTTATCTGG ATGTGCTGAC CCGTCGCGAA TTCGTGCGTC TGGCCGAAGA AAACCTCAAG
AGCCACCAGC GCATCTACGA CCAGATCCAG CTGCGCACCC AGCGCGGCGT CGGCAGCGGT
GCCGACCTCG ATCAGGCCGA AGCGCGGATG GCCCAGGCCC GCAACAACCT GATCACCGAG
CAGACCAACC TCGCCGACTC GGAAACCAAC TTCCTCAGCG CCGTCGGCCA GATGCCCGAT
CAACTGGAGC GTCCGGCGCC GTTCATGGCG ATGATGCCGG CCAACCTGAA TGAAGCGCGC
CAGCAGATGC TGGAAAACAG CCCGATCCTG CGTTCGGCCG AGTCCGACAT CGCCGCGGCC
GAGAAGCAAT ACGAGACTGC CAAGTCGACC TTCTACCCGC GCTTCGACGC CGAGCTGGGC
CGCACCGCCG ACAACGATCT CGACGGCCAG AACGGTCACA ACAACGAATG GCAGGCCATG
CTGCGCATGC GCTTCAACCT GTATTCGGGC GGCAGCAACA AGGCGGACCT GGAGTCCAAG
TCCTACCTGT CGAACCAGGC GCTGGACATC CGCAACAACG CCTTGCGCCA ATTGAATGAA
GAACTGGGCC TGGCCTGGAA CGCCCTGAAC AACGCCAACG CCCAAGTGCC GATCGCTCAG
CAGTACGTTG ATCACAGCAC CTCGGTGCGC ACCGCTTACC AGCGTCAGTT CAGCCTCGGC
GAACGCACCC TGCTGGATTT GCTCGACAGT GAAAACGAGC TGTTCACCGC TTCGCGCCGT
CTGGCCGAGA TCAAAAACAT TCAGTTATTT ACTCAGTATC GAATCAAGGC GACCATGGGC
GAGTTACTCA AGAGCCAGGG AGTGGTCGCA CCCTTGGCAT CCGTTGTGCA GAACGACGTG
AAGCCCAAGG TCCAGCTGCC TGGGATGAAT TGA
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| Protein sequence | MRSHLFKALP FALAASFVQA QSLPEAMQQA LDVHPEIQAG VNSRLAADYQ LKAAKGGYLP
KVDLLGGYGR EGTDSVTTRA NGGGNHWETL NRSESSLRLS QMVFDGFATS SEVGRQQATV
NSRAYSLLGT SERTALTVAQ VYLDVLTRRE FVRLAEENLK SHQRIYDQIQ LRTQRGVGSG
ADLDQAEARM AQARNNLITE QTNLADSETN FLSAVGQMPD QLERPAPFMA MMPANLNEAR
QQMLENSPIL RSAESDIAAA EKQYETAKST FYPRFDAELG RTADNDLDGQ NGHNNEWQAM
LRMRFNLYSG GSNKADLESK SYLSNQALDI RNNALRQLNE ELGLAWNALN NANAQVPIAQ
QYVDHSTSVR TAYQRQFSLG ERTLLDLLDS ENELFTASRR LAEIKNIQLF TQYRIKATMG
ELLKSQGVVA PLASVVQNDV KPKVQLPGMN
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