Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0033 |
Symbol | |
ID | 3717652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 35160 |
End bp | 36578 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | IS4 family transposase |
Protein accession | YP_345766 |
Protein GI | 77456261 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0505315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.376694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTACA TACAAGGAGA GTCCCGTAGC CAGACCAGCC TGTTCCCGGT CTCGCTGGAG GAACTGATCC CTGAAGATCA CCTCGTACGA GTCATCGACC TGTATGTCGC CAAGCTCGAT CTGGGCCAGC TCGGTTTTGA GAAAGCTCAG CCCAAGGCCT CTGGGCGCCC TGCTTACGAC CCCGCCGATC AGCTCAAGCT CTATCTCTAT GGCTATTTTC AGCGCATTCG CTCGTCGCGG CGCCTAGAAG CTGAGTGCCA ACGCAACATC GAAGTGATGT GGTTGATCAA CCGGCTTAAA CCCGACTTCA AGACCATCGC CGACTTTCGC AAGAACAACA AAGTAGCTTT CGTTACAACG TGCCGAGCTT TTGTGCAGTT CTGCCGATCC GTCGGCTTGA TTGCGGGTGA TCTGGTTGCG ATCGACGGCA GTAAGTTTCA GGCAGTCGCT TCCTCGCGAC GCCACCTGAA TTTGAATCAG CTCAAGCGTC AGGAGGAGAA GCTGGATAAG CGGATTGCCC AATACTTGGC TGACCTGGAT GCCGCTGATA AAGCAGAGGG CGAGCAAGTG GTCGATCGCA CTGCGATCAA GGCGGCACTG GCGAAGCTTG AGGCCAAGCA GCAAGACAAC CGTAGTTGCC AAGCTTTGAT GAAGTCGATG AGCCTGGAGC AATTCAACAC GCACGAAAGC GATGCCCGAA TGATGCGCAC GCCAAAGGGG GCGCGTGTTG CCTATAACGT GCAAACAGCC GTGGACGCAG AGCACTGTCT GATTTTGCAC CATGAGGTGA CGCAAGATGG TGACGACCGC AAACAGCTTG AACCCATAGC TAAAGCTGCC AAGGCCGAAC TGGGGCAGGA CACGCTGACC GTGACAGCCG ATATGGGCTA CTCAAATGGC CAGCAATTCC AGGCGTGCGA GGAGGCCTCC ATTACCGTGT ACGTGCCGCC AAACCGAACT TCGAACCCAG GCGGAGAGAC ATTATTCGAG CGCCAGGACT TTACCTATGA CGCTGAACAG GATCGATACC AGTGCCCGGC AGGTCAATGG CTAACCCTGA AGCAGCGTTA CAAAGGCGAC CGGATCTACC AGGCGGCAGT CAGCGACTGC GCTGGATGTG CGCTGAAAGC CCAATGTACA ACGGCTCAGC GCCGCTATGT CTCACGTCAC GCACAAGAGG AAGCCTTTGA GCGTATGGCA CAGCGGATGC AACTGCATCC AGAGATGATG GAGCGACGCA GATCCATCGT GGAGCACCCG TTTGGCAATC TCAAACAATG GCTATTTGGT AACGGGCGGT TCTTGCTACG ACAACTTGAA GGGACGAAAG CTGAAATGGC ACTGGCCGTG ACCGCGTACA ACTTCAAGCG GGCGATCAGT GTCCTGGGAG CCAAAAAAAT GATGCAACTG ATGGGCTGA
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Protein sequence | MAYIQGESRS QTSLFPVSLE ELIPEDHLVR VIDLYVAKLD LGQLGFEKAQ PKASGRPAYD PADQLKLYLY GYFQRIRSSR RLEAECQRNI EVMWLINRLK PDFKTIADFR KNNKVAFVTT CRAFVQFCRS VGLIAGDLVA IDGSKFQAVA SSRRHLNLNQ LKRQEEKLDK RIAQYLADLD AADKAEGEQV VDRTAIKAAL AKLEAKQQDN RSCQALMKSM SLEQFNTHES DARMMRTPKG ARVAYNVQTA VDAEHCLILH HEVTQDGDDR KQLEPIAKAA KAELGQDTLT VTADMGYSNG QQFQACEEAS ITVYVPPNRT SNPGGETLFE RQDFTYDAEQ DRYQCPAGQW LTLKQRYKGD RIYQAAVSDC AGCALKAQCT TAQRRYVSRH AQEEAFERMA QRMQLHPEMM ERRRSIVEHP FGNLKQWLFG NGRFLLRQLE GTKAEMALAV TAYNFKRAIS VLGAKKMMQL MG
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