Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2275 |
Symbol | |
ID | 3705067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2624967 |
End bp | 2625461 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637738754 |
Product | general secretion pathway protein H |
Protein accession | YP_344263 |
Protein GI | 77165738 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGATA ATAGCCGTAT GAATATTGAG AACCAAGAAA AAACCCCTGG GCCGCAAAGA AAACAACGGG GCTTTACCTT AATCGAACTC ATGATTGTGG TGGCTATCGT CGCTATCCTG GCAAGCGTCG CCTTTCCAAG CTACCAGGCC AGTGTTAAAA AAAGCCGACG GGGCGACGCT CAAGGAGCAT TGGTGGCATT TGCCGCCGCC ATGGAACGCC ATTTTACTGA GAGGAGTACC TATGAGGGTG CCGCTACCGG GGGCGCTAAT ACGGGAGCTC CTGATATTTT TGCCAGTGAG GCGCCCTTGG ATGGAAGAGA CAAATTCTAC GATCTAACCA TTGAGGCAGC GAGTGGAGCA ACGTACACTT TACGAGCCAC TCCTAAAAAC ATTCAGGCAG GAGACGGCTT TCTGGAGCTG CTCAGCACCG GCGCCCGACG ATGGGATGAA AACAACGATA ACGCAATTGG GGCTGGCGAG AGTGATTGGA AATAA
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Protein sequence | MEDNSRMNIE NQEKTPGPQR KQRGFTLIEL MIVVAIVAIL ASVAFPSYQA SVKKSRRGDA QGALVAFAAA MERHFTERST YEGAATGGAN TGAPDIFASE APLDGRDKFY DLTIEAASGA TYTLRATPKN IQAGDGFLEL LSTGARRWDE NNDNAIGAGE SDWK
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