| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1038 |
|---|
| Symbol | |
|---|
| ID | 3707260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1147182 |
|---|
| End bp | 1148399 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637737543 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_343076 |
|---|
| Protein GI | 77164551 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.548207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATGA GTTCCCTACA ATCCCAGCGC GTGCTTTCCG GAATGCGTCC AACCGGGCAG
CTGCATCTGG GCCACTATCA TGGCGTACTG AAAAACTGGG CCCGGTTGCA ACACGAATAC
AACTGTTTTT TCTTTGTGGC CGACTGGCAT GCTTTGACGA CGGAGTACGA AAATCCCCAG
GTAATTACCG ACAGCGTCTG GGATATGGTC ATCGACTGGC TGGCTGCGGG AATTGAGCCT
TCGGCAGCGA CTTTATTTAT TCAGTCGAAG GTGCCTGAGC ATGCGGAGTT GCATCTTCTA
TTATCCATGA TAACTCCCCT TGGTTGGTTG GAACGGGTGC CGACTTACAA GGACCAGCAG
GAAAAATTAA AAGAGAAGGA TCTGGCGACT TATGGTTTTT TGGGCTACCC GCTACTGCAA
AGCGCCGATA TTCTCGTTTA TAAAGCAACT CGGGTTCCAG TGGGAGAAGA TCAGGTTCCT
CACGTGGAGA TGAGCCGGGA AATTACCCGG CGTTTTAATC ATCTCTATGG CCGTGAACCA
GGCTTTGAAG AGCTGGTGGA AGCGGCTATA AAAAAAATGG GTAAGAAAAA TGCCCAGCTT
TACCGGGAAT TGCGCCGTCG TTTCCAGGAG CAGGGAGATG TGGAAGCCTT GGATAAAGCT
CGTGCTTTTC TAGAAACGCA GCAGAATCTT ACCCTTGGTG ATCGGGAACG TTTATTCGGC
CATCTGGAAG GGGAAGGTAA AGTCATTCTG CCGGAACCGC AGGCCTTGCT GACCCCAGCC
GCTCGTATGC CAGGGCTCGA TGGACAAAAA ATGTCTAAAT CCTACGGCAA TACGATTGCC
TTGCGTGAGC CACCTGAGCA AGTGGAACGG AAGCTCCGCA CCATGCCTAC GGATCCAGCC
CGCGTGCGGC GCACCGATCC CGGCGATCCC GAAAAATGTC CGGTCTGGCA ATTCCATAGG
GTTTACTCTG ACGATGAGGT GAAGGAGTGG GTTCAGAAAG GATGCAGAAC AGCAGGTATT
GGTTGCTTGG ACTGCAAGCA GCCAATTATT GATGCTATTC AGTCTGAACT AAAGCCTATT
CGAGAGCGGG CGCAAGAATA TGCTCACCAT CCCGAGGAGA TCCAACGGAT TATCAAAGAG
GGTAACGAGG CGGCCCGCGA AGTGGCCCGC GAGACGATGG CGGAGGTGCG CCAAGCAATG
GGATTGTCCT ATCGTTAA
|
|---|
| Protein sequence | MAMSSLQSQR VLSGMRPTGQ LHLGHYHGVL KNWARLQHEY NCFFFVADWH ALTTEYENPQ
VITDSVWDMV IDWLAAGIEP SAATLFIQSK VPEHAELHLL LSMITPLGWL ERVPTYKDQQ
EKLKEKDLAT YGFLGYPLLQ SADILVYKAT RVPVGEDQVP HVEMSREITR RFNHLYGREP
GFEELVEAAI KKMGKKNAQL YRELRRRFQE QGDVEALDKA RAFLETQQNL TLGDRERLFG
HLEGEGKVIL PEPQALLTPA ARMPGLDGQK MSKSYGNTIA LREPPEQVER KLRTMPTDPA
RVRRTDPGDP EKCPVWQFHR VYSDDEVKEW VQKGCRTAGI GCLDCKQPII DAIQSELKPI
RERAQEYAHH PEEIQRIIKE GNEAAREVAR ETMAEVRQAM GLSYR
|
|---|
| |