Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0294 |
Symbol | |
ID | 3706465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 321908 |
End bp | 325033 |
Gene Length | 3126 bp |
Protein Length | 1041 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637736809 |
Product | heavy metal efflux pump |
Protein accession | YP_342353 |
Protein GI | 77163828 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.393519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCACGC TCACTGAAGC CGCCATGATC GCCAAAATAA TTCAATGGTC CCTGAAGCAA CCCTTGCTGG TTCTCCTGAG TGCCGCCGCC CTCTTAGGGT GGGGAAGCAT TGAGGCCCTG CGAATGCCTG TAGATGTCTT CCCCGATCTG ACCACGCCCC GAGTAACGGT TGTGGTTGAG GCCCATGGCA TGGCTCCGGA AGAGGTGGAA GTTCTCATCA CTTTCCCTCT GGAGACAGCG TTTAATAGCG CCATGGGCGT ACGGCGGGTG CGCTCTTCAA GCGGTGTTGG CTTTGCCGTC ATCACGGTTG AATTTGACTG GGGAATGGGT ATTTATCGAG CCCGGCAAAT TGTGGCTGAG AAACTGCAAT TAGTGCGTGG CGCGTTGCCG CCCGATATTC CGCCGCCAGT GATGCAGCCA GTGACTTCCA TCATGGGCGA GATTATGTTC ATTGCCTTGA CCTCCGAGAG GCACAGCGCT ATGGAACTCA AGACCCAAGC GGACTGGGTA GTGCGCCACC GCTTGCTGGC GGTTCCAGGT GTAGCTCAGG TCATTCCCAT CGGCGGCGAT ACCAAACAAT ACCAGGTCAT ACTCAAACCC GAGCGCCTGG TTGCCTACGA TATTGCCATG GATGAAGTGG TGGCGGCCTT ACGGGAGACT AACCAGAATA TCTCGGCGGG GTTTTATGTG GAAGGAGGTC AGGAGCACCT TATTCATGGG ATAGGCCGGG TTCAGCGCCT TGAAGATATC CGCGAAACCC TTATCGGCCA GCGTGGCGGT CAGTCCGTGT TGGTGCGCCA TGTGGCGGAA GTGGCTTTGG GCCCGGCCCC CAAACGGGGC ACCGGCGCTC TGAATGGGGA AGCGGCGGTA ATTATTGGAA TCCAGAAGCA GCCCGGCACG AATACGTTGG CCCTGACGGC GCGTCTGGAT CAAGTTTTGG CCGAGCTACA GGCCTCCTTG CCGTCAGGGA TGATCTTCAA CACTCATATT TTCCGGCAGG CGGATTTTAT CACCGTTTCT ATCAATAATT TGCTGGCGGC CCTACGGGAT GGGGCGATTC TGGTGGCCGC GATCGTCTTT GCCTTTCTGA TGAGCACCCG GGCCAGTGTG ATTACCTTGC TTGCTGTGCC CCTTTCTTTG GTAACCGTTA TTCTTGTGAT GAAGGCCCTG GGGACAACTT TCAACACCAT GACTTTGGGG GGGATGACCA TTGCCCTGGG GGCTTTGGTG GATGATGCCA TTATCGTGAT GGAAAATATT GTCCGCCGCC TGCGGGAAAA TCAGCAGCGG GATAAGGGAC AACGACGCTC CACCGGCAAA GTGGTCTTTG AAGCTACCCG AGAAATTCAG GGTTCTATTG TCTTTGCCAC CTTGATCATT GTCTTAGTTT TTCTACCCCT GGTTTTTCTC TCTGGGGTAG AAGGTCGTCT GATGCAGCCC CTCGGGGTGG CCTACGTCGT TTCTCTGGCC GCCTCCTTGC TGGTGGCTAT TACCGTGACT CCGGTACTCA GCGCCTTACT TTTGCCTCAA GCTCGGATTG TCCAGGCGAG CCGGGAGATC TCGCTAGCGC GAAGTCTCAA AAGGCACTAT GAGCGGCTCC TTGCAGCGAC TATTACCCAG TGGAAAGTTA TTACCTTGAT TGCAATGACT GCTTTGGCTG CTGCGCTGAT AACTCTTGCT GGAGTGGGGC AGGTGCTTTT GCCGAGCTTT AATGAAGGTA GCCTCACAAT CAACACGATG ACATTGCCAG GGACTTCCTT GGAACAATCT GATCGGCTGG GGCAAAGAGT GGAGAAAATC CTGCTGAGCT ATCCGGAGGT GGTGTCTACG GCCCGGCGGA CCGGCCGGGC CGAGCTCGAC CCCAACGCCC AGGCCATCTA TGCTTCCGAG ATCGATGTGA ATTTGAGGCA GGGAGAGCGG AGCAAGGAAG CTTTTTTGGC GGCCTTGCGA GCGGATTTAG CCCGCCTTCC TGGGATGCAA ATCAACATTG GCCAGCCCAT TTCACACCGC ATCGATCACA TGCTTTCGGG GACCCGCGCC AATATTGCGG TCAAGATCTT CGGGCCTGAC CTCTATGAAT TACGCCGGCT AGGACAACAG GTTAAGGCCG TGATGGCAGG AGTGCCCGGT GTGGTGGACC TAGCGGTACA GCAACAGACG GATATTCCCT TTCTGACAAT TAGGTTTAAA CGCCAGGCCA TTGCTCGCCA TGGCCTGCGG GTGCAAGAGG TGGCCGAGGC GGTGAAAGGG GCTTTTTATG GGCAGCCCGT TTCCAAAATC CTGGAAGGAC GGGCCAACTT TGACTTGGTC GTGCGCTATG ATCCGAGAGT CAAAGCTGAT CTAGAAGCAG TCCGTGCCAC CTTGATGACC ACCGGAAGCG GCGCTCATTT GCCTCTCCAT GCACTAGCAG AGATCCGCAA AGATCGGAGT CCTAATTTCA TCAGCCGGGA AGATGTTCAG CGTAAGATGG TGGTCATGGC CAATGTGGCG GGCCGGGATC TCGTCAGTGC CGTCGAGGAG ATACAACAGG GTGTCCGTCA GAGTTTGTCA CTGCCTGCAG GTTACCATGT TGAATATGGT GGTCAATTCA AGAGCGCCAA AGCAGCTTTC CGCACTTTAT CAATCGTCAG CGTCCTAGTT ATTCTGGGCA TCTTTCTATT GTTATTTATG GCGTTCAATT CAGCACGAGA TGCTTTCCTG GTGATGCTAA ATCTGCCCCT TGCCCTGATA GGTGGGGTCG TGGGTGTTTA CTTCTCCGGG GGAATACTTT CGGTGGCTTC GATCATTGGC TTTATTACCC TGTTTGGGAT TGCGACCCGT AATGGAGTCA TGATGATTGC CCATATCCAT CACTTGGTAG AGCGGGAGAG GGTGCGGGAT CCCATGACGG CGGTGATCCG GGGGGCCAAG GAGCGTCTTA TTCCCATTCT TATGACAGCC TTAGCCACGG CGCTTGCCCT CATTCCCTTG GCGTTGGGCG CGGGAGAGCC GGGGAGTGAG ATCCAAGCCC CTATGGCCAT GGTGATCCTC TTCGGTCTTT TGACTTCAAC GGCGCTTAAT ATGATGGTAG TCCCGGCTCT CTATCTGCGT TTTGGCGTGG CGAGTCAAAA GTTGAGGCAT CCATGA
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Protein sequence | MVTLTEAAMI AKIIQWSLKQ PLLVLLSAAA LLGWGSIEAL RMPVDVFPDL TTPRVTVVVE AHGMAPEEVE VLITFPLETA FNSAMGVRRV RSSSGVGFAV ITVEFDWGMG IYRARQIVAE KLQLVRGALP PDIPPPVMQP VTSIMGEIMF IALTSERHSA MELKTQADWV VRHRLLAVPG VAQVIPIGGD TKQYQVILKP ERLVAYDIAM DEVVAALRET NQNISAGFYV EGGQEHLIHG IGRVQRLEDI RETLIGQRGG QSVLVRHVAE VALGPAPKRG TGALNGEAAV IIGIQKQPGT NTLALTARLD QVLAELQASL PSGMIFNTHI FRQADFITVS INNLLAALRD GAILVAAIVF AFLMSTRASV ITLLAVPLSL VTVILVMKAL GTTFNTMTLG GMTIALGALV DDAIIVMENI VRRLRENQQR DKGQRRSTGK VVFEATREIQ GSIVFATLII VLVFLPLVFL SGVEGRLMQP LGVAYVVSLA ASLLVAITVT PVLSALLLPQ ARIVQASREI SLARSLKRHY ERLLAATITQ WKVITLIAMT ALAAALITLA GVGQVLLPSF NEGSLTINTM TLPGTSLEQS DRLGQRVEKI LLSYPEVVST ARRTGRAELD PNAQAIYASE IDVNLRQGER SKEAFLAALR ADLARLPGMQ INIGQPISHR IDHMLSGTRA NIAVKIFGPD LYELRRLGQQ VKAVMAGVPG VVDLAVQQQT DIPFLTIRFK RQAIARHGLR VQEVAEAVKG AFYGQPVSKI LEGRANFDLV VRYDPRVKAD LEAVRATLMT TGSGAHLPLH ALAEIRKDRS PNFISREDVQ RKMVVMANVA GRDLVSAVEE IQQGVRQSLS LPAGYHVEYG GQFKSAKAAF RTLSIVSVLV ILGIFLLLFM AFNSARDAFL VMLNLPLALI GGVVGVYFSG GILSVASIIG FITLFGIATR NGVMMIAHIH HLVERERVRD PMTAVIRGAK ERLIPILMTA LATALALIPL ALGAGEPGSE IQAPMAMVIL FGLLTSTALN MMVVPALYLR FGVASQKLRH P
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