| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1022 |
|---|
| Symbol | |
|---|
| ID | 3692959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 1285481 |
|---|
| End bp | 1286428 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637731276 |
|---|
| Product | decarboxylase family protein |
|---|
| Protein accession | YP_336180 |
|---|
| Protein GI | 76818869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAC CGCCCCCACC ACGCGCCAAG CGCCGCCGAA CGCGCACCGC GTCCGCGCCC
GCGCCCGGAA TGCGCCCGAC GCCGCGCCGC ACGCGCACCG CGCCGAAGCG CCGCGCGCCA
CTGTCGAGCA CCGTCGAGCG GCTCGTATCG AGCCCGACGT ATCGGCAGGC CGACGAGGAT
CTCGCGTTCC TGCAGCGCCC CGAAATGTGC GGCGTGCGCT TGCAGCTCGA CTACTGGAAG
ACCGAGGAAA CGCTGCAACG CTTCGGCATC TGCGATACGG TGGTGGTCTA CGGCAGCACG
CGGATCGCGT CGCCCGCCGT CGCGCGCGCG AGGCTCGCCG ACGCGCAGCA CCGGCTCGCC
GAGCGTCCGA ACGACCCCGA GCGCCGCCAT GCGGTCAGCG TCGCGGTGCG GCTGCTCGAG
CGCAGCCACT ACTACGGCGT CGCGCGCGAT CTCGGCCGGC TCGTCGGCGA AACCGGCCGC
TCGCCGCATC CTCGGCGCCT CACGATCATC ACGGGCGGCG GTCCGGGCAT CATGGAGGCG
GCCAATCGCG GCGCGCACGA GCGGGGCGCG CCGAGCATCG GGCTCAACAT CACGCTGCCG
CGCGAGCAAT TCCCGAATCC CTACGTGACG CCCGAGCTGT GTTTTCGCTT CCATTACTTC
GCGATCCGCA AGCTGCACCT GCTCGAACGC GCGAAGGCCG CGGTGTTCTT TCCCGGCGGC
TACGGCACCT GCGACGAGCT GTTCGAAGTG CTGACGCTGT TGCAGACCCG CAAGATCGCG
CCGCTGCCCG TCGTGCTCGT CGGCCGCGCG TTCTGGCGCT CGGCGGTCGA TTTCGGGTTT
CTCGTCGACG AAGGCATGAT CGACCCGTGC GACGCAGCGC TGTTCCGGTT CTGCGAAACC
GCCGACGAGA TCTGGGCCGC GATCGGCGGC CCGCACGGGC CGGCCTAG
|
|---|
| Protein sequence | MNPPPPPRAK RRRTRTASAP APGMRPTPRR TRTAPKRRAP LSSTVERLVS SPTYRQADED
LAFLQRPEMC GVRLQLDYWK TEETLQRFGI CDTVVVYGST RIASPAVARA RLADAQHRLA
ERPNDPERRH AVSVAVRLLE RSHYYGVARD LGRLVGETGR SPHPRRLTII TGGGPGIMEA
ANRGAHERGA PSIGLNITLP REQFPNPYVT PELCFRFHYF AIRKLHLLER AKAAVFFPGG
YGTCDELFEV LTLLQTRKIA PLPVVLVGRA FWRSAVDFGF LVDEGMIDPC DAALFRFCET
ADEIWAAIGG PHGPA
|
|---|
| |