Gene Ava_4964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4964 
Symbol 
ID3679073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6244145 
End bp6244897 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content39% 
IMG OID637720322 
Productpentapeptide repeat-containing protein 
Protein accessionYP_325456 
Protein GI75911160 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACCA TGATTTTTAA TGTTTATCGT ACAGTTGCAG GAAAGATACA ACACAACAAT 
TTAATAGAGA ATCTCATTGA TAGGATAGTT TTTTCTGGTC AAAAAAAGAT CGCCTGTGGT
GAGCGGAATA GCATCACCCA ACGCTTACAA GAAGCTATAA GAGACTTGCA CCACAATCAA
ACAATAGAAA CCAGGCTCAA AGCCATTTAT GAGTTAAAGC AAATAGCCCA TGATTATCCA
AAACAGCACT GGCTAATCAT GGAAGTTCTC AGTAATTTTA TCCACAATTG TGCTAATAAT
ATCTCGTCCG CACAGCTAAC ATCATCAATT GATGCAGAAA TTCAAGCTGC TTTAACTGTG
ATTGCTCATA GGGATACAAC GCAAGACCCA GAAAATCAAC AATTAGATTT GAGCCATATC
GATATAGCGG GAGCGAATCT CAGCAAAGCC AATCTAGAAA ACGCGAATCT CTATCGTGTT
AATCTCGCTG GTGCAAATTT ATTACAAGCC AATCTCTGTG GGGCAATTTT AACCGCCGCC
AACCTTTCTG GTGCTAACTT AGCTGGGGCA AATTTATCTG GCTCCATCCT TAGTGCTGCA
AACCTAGTCG GTGCAAATCT CACGGGGGCA AATTTGGCAG GAGCAAATTT ATATTTAGCT
AATTTACAGG AAGTAATTTT ACATGAGGCA ATATTTAACG GGGCAAATCT ACGAGAAGCA
AAATTTACTA CGGCCGACAC TTCTAATAGA TAA
 
Protein sequence
MLTMIFNVYR TVAGKIQHNN LIENLIDRIV FSGQKKIACG ERNSITQRLQ EAIRDLHHNQ 
TIETRLKAIY ELKQIAHDYP KQHWLIMEVL SNFIHNCANN ISSAQLTSSI DAEIQAALTV
IAHRDTTQDP ENQQLDLSHI DIAGANLSKA NLENANLYRV NLAGANLLQA NLCGAILTAA
NLSGANLAGA NLSGSILSAA NLVGANLTGA NLAGANLYLA NLQEVILHEA IFNGANLREA
KFTTADTSNR