| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4892 |
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| Symbol | trpC |
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| ID | 3679177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 6161090 |
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| End bp | 6161932 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637720250 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_325384 |
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| Protein GI | 75911088 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0121047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGTATC CCAGCGCCAT TAATACCAAC CGTCTGCAAC CAATTATCAG AGAAATTGTT
TGGCAAAAAA AGCAAGAAGT TGCACAACTA CACCAACAGA TGTCATTGGC TTCCTTACAA
CGCCAATTAA CTGCTGCGCC AACCGTGCGG GATTTCTTGA CAGCCTTGCA GCAAAATCCT
TACCAACCTA GCCTGATTGC AGAAATACAA AAAGCATCAC CCAATCATGG TATGATTCGT
GCTGATTTTG ATCCAGTAGC GATCGCCAAA GCTTATGAAC GAGGTGGCGC AGCTTGTCTA
TCAGTAGTGA CAGATACCTC ATTTTTTCAT GGTAGTTTTG AAATTCTCCG TGCTATACGC
CAACGGGTAC CATTACCCAT ATTATGCAAA GAGTTTATTA TCGACCCCTG CCAAATTTAT
TTAGCACGAG CAGCAGGAGC CGATGCAGTA CTATTAATTG CAGCTATTCT CACAGACAGA
GAACTGAAAG ATTTTTTGCG AATAATTCAC TTTCTGGGGA TGAATGCCTT AATCGCAGTT
CATAGTTTAG CTGAACTAGA TAGGATACTC AAACTAGACG ACATTCGCTT AATCGAAATT
AACAACCAAA GTCTGCAAGA TTTTACCACA GATATCAGCA CCACCCAAAA TTTATTAGCA
GCTAGGCGAT CGCATCTACA AAACTTGGGT ATCACCGTCG TCAGCGAATC TGGATTATAT
ACACACACAG ACTTATCCTT AGTCACGGAA GCTGGCGCAA ATGCCGTGAT AGTCGGAGAA
TCTTTAATTA AAGAACAAGA TATCGAGTTA GCTGTACGTC ACCTGCTTAC AGGGAATAAA
TAA
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| Protein sequence | MLYPSAINTN RLQPIIREIV WQKKQEVAQL HQQMSLASLQ RQLTAAPTVR DFLTALQQNP
YQPSLIAEIQ KASPNHGMIR ADFDPVAIAK AYERGGAACL SVVTDTSFFH GSFEILRAIR
QRVPLPILCK EFIIDPCQIY LARAAGADAV LLIAAILTDR ELKDFLRIIH FLGMNALIAV
HSLAELDRIL KLDDIRLIEI NNQSLQDFTT DISTTQNLLA ARRSHLQNLG ITVVSESGLY
THTDLSLVTE AGANAVIVGE SLIKEQDIEL AVRHLLTGNK
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