Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4440 |
Symbol | |
ID | 3680433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5561827 |
End bp | 5563422 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637719794 |
Product | S-layer region-like |
Protein accession | YP_324933 |
Protein GI | 75910637 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.016737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAAA TATGGAAGTA TTGGCTGGTT AACCCAGTAA TTTGCAGCAC AATGCTATTT TCTGGCGCTG CGGCCTTTGC AGGAGAAACC CCTGCCACAA CAGAAATAAA TGAAACCTCA GAAACCTCAA AAATAGCTAA TGCAGAACTA GCTACTCAAC AAGAGGTAAT GTCACAAGTT ACCTCAGTTT CTCAGTTTTC CGACGTACAA CCTACAGACT GGGCTTTCCA AGCATTGCAA TCACTGGTAG AACGTTATGG TTGTATTGCA GGGTATCCCA ATGGGACATA CCGTGGTAAT CGCGCCCTGA CCAGGTATGA ATTTGCCGCA GGTTTGAATG CTTGTCTGGA TCGAGTCAAT GAACTCATAG CTACTGCCAC GGCGGAGTTA GTCACAAAAG AAGACTTAGC TACACTACAA AAGCTACAAG AAGAGTTTTC TGCGGAACTA GCAACATTAA GAGGTCGAGT TGATGCTTTA GAAGCACGTA CCTCGGAATT AGAAGCCAAT CAATTCTCGA CTACAACAAA GCTGCAAGGA CAAGTAGTAT CAGTTATCAG CGATGTCTTA TCAGGCGATC GCGTCAATAA TGCAGATATC GTCGATACAA ATACTACTCT GGGAGTACGG GCGCGATTAG AACTTGTCTC CAGCTTCACT GGGCAAGATA CCTTGTTCAC CAGAATTGAA GCTAACAACA TTACTAGCCC CGACATTAAT ACTCCAGAAG GTAACCTATT CTTCGCTAGT GCTGCACCTA GTACTAACGC TGCTATTGGT ACTTTGTGGT ATGGCTTTCC CTTAGGCAAG AACACCCAAG CCAAGCTAAT TGCTGTTGGC GGCGCAGCAG ACGACCTCAC CAGTACCGTA AACATATTTG ATGGAGATGG TGCTTTTGGT GCTTTAACTA CCTTTGGTAC ACGTAACCCG ATTTATGGGC AGATAGGTGG TACTGGTCTG GGTGTCACTC ACCAGTTTAG TGATAAATTA GCCTTGAGCT TGGGTTATTT GAGCGGTACA GCAAATAACC CATCACCCCA AAACGGTTTA TTTGATGGCG CTTATGGTGC ATTAGCGCAA CTGACAGTTA GACCAAGCGA TCGCACCAGT GTTGGCTTAA CATATATCAA TTCTTATCGG CAACCTCTAG CCACTGGTAG TAACGCTGCA ACCACCTTCC AAGGTTTAGA CGAAAGATTC TCCAGCAATT CCTACGGTCT CCAAGCTTCT ATCGGTCTCA GTGAAAAATT AGTCTTGGGT GGATGGGCTG GTTACACCAA TAGCCGCATC TTGACAGGCG ATCGTGGAGA TGTTGATATT TGGAACTATG CTGTTACTCT TGGTTTCCCC GACCTTGGGA AAAAAGGTAA CTTAGCCGGT ATCATTGCGG GGATGGAACC AAAAGTCACA AGTTCTAGCG TTGCTGGACT AGATAGAGAT AGAGATACTT CCTATCATGT GGAAGCATTT TATCAATACA AAGTCAGCGA TAATATCACC ATCACACCAG GCATTATCTG GTTAACATCA CCAGACCACA ATGACAATAA TGATGATGTT GTTATTGGTG CGTTGAGAAC CACATTTAGT TTCTAA
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Protein sequence | MQKIWKYWLV NPVICSTMLF SGAAAFAGET PATTEINETS ETSKIANAEL ATQQEVMSQV TSVSQFSDVQ PTDWAFQALQ SLVERYGCIA GYPNGTYRGN RALTRYEFAA GLNACLDRVN ELIATATAEL VTKEDLATLQ KLQEEFSAEL ATLRGRVDAL EARTSELEAN QFSTTTKLQG QVVSVISDVL SGDRVNNADI VDTNTTLGVR ARLELVSSFT GQDTLFTRIE ANNITSPDIN TPEGNLFFAS AAPSTNAAIG TLWYGFPLGK NTQAKLIAVG GAADDLTSTV NIFDGDGAFG ALTTFGTRNP IYGQIGGTGL GVTHQFSDKL ALSLGYLSGT ANNPSPQNGL FDGAYGALAQ LTVRPSDRTS VGLTYINSYR QPLATGSNAA TTFQGLDERF SSNSYGLQAS IGLSEKLVLG GWAGYTNSRI LTGDRGDVDI WNYAVTLGFP DLGKKGNLAG IIAGMEPKVT SSSVAGLDRD RDTSYHVEAF YQYKVSDNIT ITPGIIWLTS PDHNDNNDDV VIGALRTTFS F
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