| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3710 |
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| Symbol | |
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| ID | 3678796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4618705 |
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| End bp | 4620096 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719060 |
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| Product | retinal pigment epithelial membrane protein |
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| Protein accession | YP_324210 |
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| Protein GI | 75909914 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAA CAGCAGTCAA TCCCTATCTA GAGGGTAATT TTGCACCTGT CCACGAAGAA
ATTACCACTG ACACCTTAAA AGTTATCGGC GAACTTCCCC CTGATTTATC AGGGATGTTT
ATCCGCAACG GCCCGAACCC TCAATGGACA CCCATCGGAC AATATCACTG GTTTGATGGT
GATGGGATGT TACACGGTGT CAGAATTAGT AATGGTAAAG CTACTTATCG CAATCGCTAC
GTCCGCACTC AAAGATGGCA AATTGAACAT GAGGCGGGTC AAGCCATCTG GACAGGATTT
ATGGAACCAC CCCAGCCAGA ACTCCCCAGT AGAAACACTG GAAATACTGC CCTTATCTGG
CACGCGGGAC AACTATTAGC ATTATGGGAA GGCGGCGCGC CCCATGCAAT TCAAGTTCCT
GATTTAGAAA CTATTGGTGA GTACACCTAC AATAACCAGC TAAGTTCTGC TTTTACCGCC
CATCCTAAGG TAGACCCAGC AACAGGGGAA ATGATGTTTT TCGGCTACTC ATTTGCACCA
CCATATCTGC ATTACAGCGT GGTTTCCGCC ACCGGGGAAT TGGTGAGAAC AATACCTATA
GATTTACCAA TGGGGGTGAT GATGCACGAC TTTGCTATCA CTGCCAACTA CACAATTTTT
ATGGATTTGC CCTTGACCTT TAGTGTAGAA CGGATGCAAC GGGGAGAACC TATGCTAATG
TTTGAGAGCG ATCGCCCTAG TCGCTTTGGT ATTCTACCTC GTCATGGTGA CAATAGTCAT
ATTCGCTGGT TTACAGCTCC ATCTTGCTAC GTTTTCCACA CTCTCAACGC CTACGAGGAC
AAAGACGAAG TAGTACTTTT TGCCTGTCCC ATGCGTTCCA CCACCGTCCT AGCTTCCCCA
GATTCCCAAA CAGACCCAGA AGCAGACATT CCCCGTTTAC ATCGTTGGCG CTTTAACCTC
AAAACTGGGA AAGTACATGA AGAAATGCTG GATGATGTCG CCTCAGAATT TCCCCGTATC
AATGAAAATT TCTTAGGACA AGCAACGAAA TATGGCTACA CTAGTCGGTT AGCAAAAGGT
TCTATACCTT TGTTTGAGGG TTTAATTAAA TACGACCTCA GCAATGCTAA GTCCCAAAAT
TATGAATATG GACAAGGACG TTATGGGAGT GAAGCTGTTT TTGTACCTCG TCCTGGTGCA
ACAGTTGAAG ATGATGGTTG GTTAATCACT TACGTTTATG ATATTGGTGA GGATAGTTCT
GAATTAGTTG TCATAAATGC CCAAGATATT AATAGTGAAC CGATAGCGCG AGTGCTACTT
CCCCAACGAG TACCTTACGG TTTTCATGGT ATCTGGGTTA CTGAAGAACA GTTGAATTTT
GGAAGAATAT AA
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| Protein sequence | MTTTAVNPYL EGNFAPVHEE ITTDTLKVIG ELPPDLSGMF IRNGPNPQWT PIGQYHWFDG
DGMLHGVRIS NGKATYRNRY VRTQRWQIEH EAGQAIWTGF MEPPQPELPS RNTGNTALIW
HAGQLLALWE GGAPHAIQVP DLETIGEYTY NNQLSSAFTA HPKVDPATGE MMFFGYSFAP
PYLHYSVVSA TGELVRTIPI DLPMGVMMHD FAITANYTIF MDLPLTFSVE RMQRGEPMLM
FESDRPSRFG ILPRHGDNSH IRWFTAPSCY VFHTLNAYED KDEVVLFACP MRSTTVLASP
DSQTDPEADI PRLHRWRFNL KTGKVHEEML DDVASEFPRI NENFLGQATK YGYTSRLAKG
SIPLFEGLIK YDLSNAKSQN YEYGQGRYGS EAVFVPRPGA TVEDDGWLIT YVYDIGEDSS
ELVVINAQDI NSEPIARVLL PQRVPYGFHG IWVTEEQLNF GRI
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