Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3641 |
Symbol | |
ID | 3679236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4540470 |
End bp | 4541072 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637718992 |
Product | TetR family transcriptional regulator |
Protein accession | YP_324142 |
Protein GI | 75909846 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.798229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAGA TTGTTGACCA TGACCAATAT CGGAAAGAAC TGCTCAGTAA ATGCTTTGAT TTATTTGCTG AAAAAGGCTA CGGTTCCATC ACCATGCGGC AAATTGCTCA AGGTTTAAAT GTTTCTACAG GTACGCTGTA CCATTACTTT CCCAGTAAAC AAACGTTATT TGAGCAATTA GTAGAAGAAA TAAGTCAACA AGATGTGAGT GCAGCATTAG CTGAGATGGA TGGAAGCAAA ACGATAGAAG AGGCGATGAC AGCCTTAGGT CGATATTTGA TTAAGCATGA AGATTACTGC ATTAAATGGA CGTATGTTTG GGTGGATTTT TGCCAAAGTC AAGATGTAGA GGAAGTACAG AAAAATATTG TATTCAAACG TGTTAATCAA CGCTATCAGC AAGCTGTTTG TGATTTTTTA GGCATTCAAG ATCCAGCGAT AGCAACCTTT GTTTTGAGCT TGATTAATGG CTTGATTTTG GAAAAACTCT GGTGCAACCA GACAATTAAT TTTCAAGAAC AATGTACTTT GTTAGGAAAA ATGTTGACAC TTTATTTAAA AAATAATCCA ACAAATCAAG TGGCTAATTA TCATCTTAAT TGA
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Protein sequence | MPKIVDHDQY RKELLSKCFD LFAEKGYGSI TMRQIAQGLN VSTGTLYHYF PSKQTLFEQL VEEISQQDVS AALAEMDGSK TIEEAMTALG RYLIKHEDYC IKWTYVWVDF CQSQDVEEVQ KNIVFKRVNQ RYQQAVCDFL GIQDPAIATF VLSLINGLIL EKLWCNQTIN FQEQCTLLGK MLTLYLKNNP TNQVANYHLN
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