Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3235 |
Symbol | |
ID | 3680579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4024118 |
End bp | 4025305 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637718586 |
Product | Phage integrase |
Protein accession | YP_323738 |
Protein GI | 75909442 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACCA AAACACCCAA AGGGAAAGTA CCCAAGGGAA ATGTCTCTAT TATTGATTCC AATGGACGGC TACAACTACG ATTTCGCTAT GGAGGGAAAA GATACTATTT ATCTCTTGGT TTACCCGATA CAAAAATAAG CCGTAAAGCA GCAGAAGCAA AAAAGAATCA GATTGAGTTG GATATTGCTT CAGGAAATTT TGATCCAACT CTGGACAAGT ACAAGCCTCA ATCAGTGCTG AGTACCGTTG AACCTGACAT TACACCCAAA GTTACACCCA AAATAACAGA ACTTTGGGAA GGTTATATCA ATTACAAATC ATCAAGCCTC AAGGAAACAA CTAAGGGATA CCACAATAGC TTCACCAAAC TGTTCCAACG TTTAGGTGAT ATACCATTGC TGGATGCTCT TAAAGTGAAA GCAGAATTGG AGAGGATAAC TACAGTAGGG CAAACCAAGC GGGCATTGAT TCAACTTAAT GCAGCTTGCA ACTGGGCTGT AAAACATAAG TTGATTGACT CTAACCCTTA TGTGGGAATG GCTAACGAGA TGCCAAAGTA CCGTTATCAA TTGGAACCTA AACCCAATGC TTTTTCAGAA CAAGAAAGAG AAAAAATTAT TAAAGCATTT AAAGATCATC GGGGAAATTG GAACGGTAGA GGCTATACAG GCATCAGTTA TAGTCATTAT GCTTCACTTG TAGAATTTTT ATTCCTGACA GGTTGTCGTC CATCAGAAGC AATTGGGCTT CAATGGAAGC ACATAGCAGA GGACTGTGGT TATATTCGCT TTGAAGAGTC AGTGACAACA TCGGGAAATG GTATCCCTAC AAGAGTACAG GGATCTAAAA ACAACAAAAA ACGGCAATTC CCTTGTTCAG AAAGATTAAG AAATTTACTG ATATCTATAA AACCTGAAAA TCCTTATTTA GATGATTTGG TTTTTCCTAG TCCAAAGGGA AAAGTAATCA ACTACAACAA TTTTTGTAAT AATGCCTGGA ATAGAATTGT TGACCCTATT AAACCAAACA CTACACCTTA TAGTTGTAGA GATACCTTCA TCACTATTCA GATTCTTAAA GGCGTTTCCG AATCAGTCAT AGGCAAATGG TGTGATACCA GCGTTGAGAT GATTGAAAAG CATTATGCAG ATTATCTAAA AATGCTGAAT TTACGTCCCA TTGATTAA
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Protein sequence | MYTKTPKGKV PKGNVSIIDS NGRLQLRFRY GGKRYYLSLG LPDTKISRKA AEAKKNQIEL DIASGNFDPT LDKYKPQSVL STVEPDITPK VTPKITELWE GYINYKSSSL KETTKGYHNS FTKLFQRLGD IPLLDALKVK AELERITTVG QTKRALIQLN AACNWAVKHK LIDSNPYVGM ANEMPKYRYQ LEPKPNAFSE QEREKIIKAF KDHRGNWNGR GYTGISYSHY ASLVEFLFLT GCRPSEAIGL QWKHIAEDCG YIRFEESVTT SGNGIPTRVQ GSKNNKKRQF PCSERLRNLL ISIKPENPYL DDLVFPSPKG KVINYNNFCN NAWNRIVDPI KPNTTPYSCR DTFITIQILK GVSESVIGKW CDTSVEMIEK HYADYLKMLN LRPID
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