Gene Ava_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2413 
Symbol 
ID3683095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3001113 
End bp3001646 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content47% 
IMG OID637717758 
Productcondensin subunit ScpB 
Protein accessionYP_322925 
Protein GI75908629 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.81218e-12 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.85843e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAATACAG CCACAGCAAC GAAAATAGAA GCGATTCTTT ATCTGAAGGG TAAACCCTTA 
TCGGTCAGTG AGATTGCCGA GTATGCCGCG TGCGATCGCG CTACCGTAGA GGAAGGCATC
ATTGAATTAA TGGACAGCTA CGCCCACCGA GATAGCGCCT TGGAAGTTGT AGAAACTACA
GATGGTTACA GTTTACAACT ACGTTCAGAC TTCCAAGATT TAGTGCAGAC AATGATTCCT
GTAGAATTGG GACTAGGTGC ATTGCGGACA TTAGCGGCGA TCGCCCTCAA TAGTCCCATC
CTGCAAAGCG ACTTGATTGA GCTACGCGGT TCCGGTGTAT ATCAACACGT ACCAGAACTA
GTTGAACTCG GTTTTGTGCG TAAGCGCCGA GATAATGAGT CCCGTTCCTA TTCGCTCCAA
GTCACTCCAA AATTTCATCA ATATTTCCAA ATAGAGCAAC TTCCCCAACC CTTTGACAAC
GACCAGAAAG AACAGCAGTT GGAACTAGAC TTAGCTGTGG GAGCAGGGGA GTAG
 
Protein sequence
MNTATATKIE AILYLKGKPL SVSEIAEYAA CDRATVEEGI IELMDSYAHR DSALEVVETT 
DGYSLQLRSD FQDLVQTMIP VELGLGALRT LAAIALNSPI LQSDLIELRG SGVYQHVPEL
VELGFVRKRR DNESRSYSLQ VTPKFHQYFQ IEQLPQPFDN DQKEQQLELD LAVGAGE