| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2254 |
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| Symbol | |
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| ID | 3679331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2810188 |
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| End bp | 2810862 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637717599 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_322767 |
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| Protein GI | 75908471 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000750634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACTT CTCTACATGA TGTATTTCAT GCGATCGCCA ACATCCGTAA TGAGCAAGAA
TTACAACCAA CGCTCATGGA TAAAATTGGC GAATATTTTG GTGTGCAACA TTGGGGCATC
TATTTAATAG ATAGTGAATC AAAACCTGAT ACCGAAACAC AGAGCATCCC CGCCGTCTGC
CTGGAAAGTA ACCCCGTAGG TCGTTATGTA GTCGAACGCC ACGCCCCCGC CCATGAACAA
CTGATCCTCA CCCCAGAAGA CTGGAAAGAC TTCTGCCCAC GCCACGACCA CGGACACGTC
ATGACCGGGC CGATAATTTG TGACGGTCGT CTCATCGGCA CACTCAACTT CGCCCGCGAC
AAAGGAAAAC CAGCCTTTAC CGCCAATGAC TTAGCCGACC TCAGCGCCCT TTGCATTCAT
TTATCAGCTA AGCTCGCTAC CCTAAGAACA AACCCCAACA TATTTAAATC CTCCACAACC
AATCCTTTAA CACCCCGCGA ACTACAAATT GCCGAATTAG TAGCACAAGG ACTAACCAAC
GCAGAAATCG CCGAAAAGCT ATGGATTACT CAAAACTCCG TGAAACAAGC CCTTAAAAGA
ATGTTCCGCA AACTTGGAGT GTCAGCCCGT GCCGAAATGG TAGCCAGACT GCAAGACCAG
CTAATTCATA GATAA
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| Protein sequence | MPTSLHDVFH AIANIRNEQE LQPTLMDKIG EYFGVQHWGI YLIDSESKPD TETQSIPAVC
LESNPVGRYV VERHAPAHEQ LILTPEDWKD FCPRHDHGHV MTGPIICDGR LIGTLNFARD
KGKPAFTAND LADLSALCIH LSAKLATLRT NPNIFKSSTT NPLTPRELQI AELVAQGLTN
AEIAEKLWIT QNSVKQALKR MFRKLGVSAR AEMVARLQDQ LIHR
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