Gene Ava_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1679 
Symbol 
ID3682235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2105883 
End bp2106167 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content45% 
IMG OID637717018 
ProductRNA-binding region RNP-1 
Protein accessionYP_322196 
Protein GI75907900 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCT ACGTTGGAAA TCTCTCATAC CGCGCCACCG AAGCAGACTT AAAAGCCGTA 
TTTGCAGACT ACGGTGAGGT CAAAAGAGTT GTATTACCTA CAGACCGTGA AACCGGTCGG
ATGCGTGGTT TTGCCTTTGT TGAAATGAAT GAAGATGCCC AAGAAGATGC AGCTATCACC
GAATTAGATG GCGCAGAATG GATGGGTCGT CAACTGAGAG TCAATAAGGC TAAACCGCGA
GAAGATGACC GACGAGGTAG TTGGGGTAAA AAACAAGATT ATTAA
 
Protein sequence
MTIYVGNLSY RATEADLKAV FADYGEVKRV VLPTDRETGR MRGFAFVEMN EDAQEDAAIT 
ELDGAEWMGR QLRVNKAKPR EDDRRGSWGK KQDY