Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1644 |
Symbol | |
ID | 3681986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2064595 |
End bp | 2066403 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637716984 |
Product | HTTM |
Protein accession | YP_322162 |
Protein GI | 75907866 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.709145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCAA ATGAAGGAAT ATCTAGAAAC ATATTGACAA AAAAGCTAGA TGATGTATTT GGGCTGGATT TGCGATCGCT AGCGGCTTTT CGTATCGGTA TCTCATTAAT TCTTCTGACT GATTTGGGCA TTCGTTTCAG CGACTACATT GCCCACTACA CCGATGCAGG CGTTATGCCC CGCATCTTAC TAGCAGACAT CAGCAAACCT TGGCACTGGT CACTCCACGC TATTAGTGGC GAACCCATCT TCCAGAAGGT GTTGTTTGGC ATTGCGGCTG TGATGGCGCT TTTAATGCTA GTGGGATATC GCACGCGGAT TGCCACCATT GCCTCTTGGG TTTTGCTTAT CTCCCTCCAC AACCGGAATC CGGCACTGAT TTTTGCCGCC GATGATGTGT TGCGTGCGCT GATGTTTTGG GCAATGTTTC TACCTCTGGG CGCTAGTTAC TCCATTGAAA GCGCTTTGAA TACTAATACT CGCAAGTTAC CAGAAAGGAT AGTTTCTGGG GCTACTTTTG CCTTAATTTG CCAGCAGTGC TTTATTTATA TATTCTCTGC CGCCTTCAAA ACCAAAAGCC CAGTCTGGGT TGATGGTAGT GCTGTTTACT ATTCTCTCAG TTTTGACCAA TACACCACTC CTCTAGGCCA CTTCCTGCTC AACTTTCCAC CACTATTAAC CCTGTTTACC TACGTTACCT TGGTGCTGGA ATGGGTAGGG CCTTTACTGC TGTTTATTCC CTTCCGTAAC AGCTTCTTTC GGATGTGTGC TGTTACTACC TTCATCTTGC TGCACGCAGG ATTTGGCTTA ACTTTGAACT TGGGGATTTT CCCATTCTTA AGCATCTTCA GTTGGTTAAC CTTCCTCCCC AGTTCCTTTT GGAATGGTCT GCACAAGCGC CTACAAACAC CAGAACGTCA AGGCTTAACG ATTTACTTCG ATGCTGATTG TGGTTTTTGT AAAAAAGTAG TGCATCTTTT ACGGACACTG CTGATTTTGC CAGGAACGCC GTTACTGATG GCGCAAGAAT ACCCAGATAT CCATACTGAT ATGCAAACCT ACAATTCCTG GGTAGTGGAA GATTGGCAGG GAAACCGACA TTTCAAATTT GAGGGAATAG CCTACATCGT TAGTCTCTCC CCTATATTCC GCTTTCTGGT TCCCCTACTC ACATGGAAAC CAGTCATGGC AGTAGGTACA AAATTTTATG AAATAATTGC TTCTAACCGC AAAATTGCAG GTAATTTCAC CAAACCCTTT AAATTTAAAC CAATACAGAT ACGCTCATCA CGGATTCTGA ATATTTTGGC GCTGCTATTG CTGTTGTACA CTTTTGTCTG GAATATCAGT AGTTACTCGC CTGATGCCTT CAAGCGCAAA GTTTGGCAAA GTACAGAATT TATCGGCCGG GCTACACGCC TAGACCAATC CTGGAGTATC TTTGCACCCG CACCCCCCAG AGATGACGGT TGGCACGTAA TTCCAGGTCG TTTGCAAGAT GGAACTGAGG TGGATATTTT CCGGGGAGGA AGTCCATTAA GTTGGGATAA ACCAGACTTG GGCTTACGAA GTGCCATTTA CCAAAATATG CAATGGCGTA CATATTTTAT TAATTTGAAT CGGGCGATCG GTAAAAAGCT CTACCCATTC TACGGAAAAT ATCTGTGCCG TACTTGGAAT GCTCAACATA CTAATGGGCA AAGTCTGAAA AGCTTTGATA TTTACTTCAT GAGTGAGCGT ACTGTACCGC CAGGTAAACA GCAAAATGTT GAGAAAAAAC AAACTTGGCA ACAGTCTTGT TCTCAATAA
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Protein sequence | MAANEGISRN ILTKKLDDVF GLDLRSLAAF RIGISLILLT DLGIRFSDYI AHYTDAGVMP RILLADISKP WHWSLHAISG EPIFQKVLFG IAAVMALLML VGYRTRIATI ASWVLLISLH NRNPALIFAA DDVLRALMFW AMFLPLGASY SIESALNTNT RKLPERIVSG ATFALICQQC FIYIFSAAFK TKSPVWVDGS AVYYSLSFDQ YTTPLGHFLL NFPPLLTLFT YVTLVLEWVG PLLLFIPFRN SFFRMCAVTT FILLHAGFGL TLNLGIFPFL SIFSWLTFLP SSFWNGLHKR LQTPERQGLT IYFDADCGFC KKVVHLLRTL LILPGTPLLM AQEYPDIHTD MQTYNSWVVE DWQGNRHFKF EGIAYIVSLS PIFRFLVPLL TWKPVMAVGT KFYEIIASNR KIAGNFTKPF KFKPIQIRSS RILNILALLL LLYTFVWNIS SYSPDAFKRK VWQSTEFIGR ATRLDQSWSI FAPAPPRDDG WHVIPGRLQD GTEVDIFRGG SPLSWDKPDL GLRSAIYQNM QWRTYFINLN RAIGKKLYPF YGKYLCRTWN AQHTNGQSLK SFDIYFMSER TVPPGKQQNV EKKQTWQQSC SQ
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