Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1460 |
Symbol | |
ID | 3682542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1801016 |
End bp | 1801837 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716799 |
Product | rod shape-determining protein MreC |
Protein accession | YP_321978 |
Protein GI | 75907682 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000590087 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000334343 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTACTG TACGTCGTTG GTGGGATCGC AAAGCCTTAC AAGTTGGTTT ATTAGGGTTA GCAGTTGGCA GTGCTTGGGT GTTGCGTCAG ACTCAAGGCG GGTTTTTAGC GGAAGCATAC CAAGTAATTA CCCGTCCTTT GCAAATGTTG CAGACAGGCC CAAGCCTAGA GGAACGCCAG GAAGAACGTC TCAAGAAAGC GCAATTCTTG GAGATGCAAA CACGCATTAC CGAATTAGAA AGTCAAAACA AAAAACTCAC AGATTTATTA GGTTACGTTC AAAACGAACC ACTAGCATCG CGTCCAGTAC CTGCAAGGGT GATAGGACGC AGTGCTGACC ATTGGTGGCA ACAAGTAACT ATTAATCGCG GTGCTAATGC TGGGATTAAA GAAGGTTATA TTGTCAAGGC TGAGGGGGGA TTAGTTGGTC TGGTAGACAG CGTTACACCT AACACCAGCC GCATATTGTT AATTAGTGAC CTCAAAAGTC AAGTCGGTGT TACTATCAGC CGGACTTCAG CCAAAGGTGT TCTGCGGGGA GATTCTTCTT CGGAGGCTGT GTTGGAATTT TACGAAAAAG TGCCAAATGC GAAAGTGGGA GATTTAGTTT CTACGTCAAC TTATAGCCAA AGATTCCCCT CTGGTTTGGC AGTGGGCAGA ATTAAATCAC TGGATTTAAA GAAATTACCC GCATCAATCG CCAAAATTGA ACTTTTTCCA GCGCTCAGTT CATTAGATTG GGTAGCTGTA TATCCCAAGG TGACAAGCCC AAATTTGGAA AATCAACACT CCAATCAGCC ACAGCAACAA AAGTCCAACT AG
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Protein sequence | MVTVRRWWDR KALQVGLLGL AVGSAWVLRQ TQGGFLAEAY QVITRPLQML QTGPSLEERQ EERLKKAQFL EMQTRITELE SQNKKLTDLL GYVQNEPLAS RPVPARVIGR SADHWWQQVT INRGANAGIK EGYIVKAEGG LVGLVDSVTP NTSRILLISD LKSQVGVTIS RTSAKGVLRG DSSSEAVLEF YEKVPNAKVG DLVSTSTYSQ RFPSGLAVGR IKSLDLKKLP ASIAKIELFP ALSSLDWVAV YPKVTSPNLE NQHSNQPQQQ KSN
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