| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0412 |
|---|
| Symbol | |
|---|
| ID | 3682631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 528394 |
|---|
| End bp | 529245 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637715741 |
|---|
| Product | penicillin-binding protein, transpeptidase |
|---|
| Protein accession | YP_320933 |
|---|
| Protein GI | 75906637 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2602] Beta-lactamase class D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0605163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAA ATCGACGAAA TTCCCTGGCA ATAATCGTCG CTATCACTAC CTTTGTGATA
TTTTTAACAA CTAGCAATTT TCCAGGTATG CCAGGACACT CCCAGGAAAT TCAGACACCT
GCAATTCCTG TGAGTGTTAA CCTTGGACGT TCATTTAATC AACTGGGCAT CAAAGGTTCT
ATTCTAATTT ACGATCGCAA CAACAAAAAA TTTTACGAAC ACAACACTGC TCGCAACTCA
CAATCGTTCC TTCCCGCCTC GACTTTTAAA ATTTTTAACT CTCTCGTAGC TTTAGAGACT
GGGGTGATTT CCAATGACGT AGCTATTTTG ACTTGGGACG GTATTCAGCG CCAGTTCCCC
ACATGGAATC AAGACACCAA TATACGCCAA GCATTCAGAA ATTCGACAGT ATGGTTTTAC
CAAGTACTAG CTCGAAAAAT TGGTTATGAA CGGATGGAGA AATTTATCAA GCAAGTCGGC
TATGGGAACC TGCAAATCGG CACACCTGAG CAAATTGACC GATTTTGGCT AGAAGGGCCT
TTGCAAATTA CACCCAAACA ACAGATTGAG TTTCTACAAC GTCTGCACCG CAAAGAGTTA
CCCTTTTCCC AACGTACTTT GGATCTAGTT CAAGACATCA TGATTTACGA ACGTACTCCA
AATTATATAT TGCGAGGAAA GACAGGCTGG GCGGCAAGTG TTACCCCGAA TATTGGCTGG
TTTGTTGGAT ATTTGGAACA AAACAATAAT GTATATTTCT TTGCCACCAA TATTGATATA
CGCAATAATG ATGACGCTGC TGCCCGAATT GAAGTTACTC GGCGCAGTCT CAAAGCTTTA
GGATTGCTAT GA
|
|---|
| Protein sequence | MSQNRRNSLA IIVAITTFVI FLTTSNFPGM PGHSQEIQTP AIPVSVNLGR SFNQLGIKGS
ILIYDRNNKK FYEHNTARNS QSFLPASTFK IFNSLVALET GVISNDVAIL TWDGIQRQFP
TWNQDTNIRQ AFRNSTVWFY QVLARKIGYE RMEKFIKQVG YGNLQIGTPE QIDRFWLEGP
LQITPKQQIE FLQRLHRKEL PFSQRTLDLV QDIMIYERTP NYILRGKTGW AASVTPNIGW
FVGYLEQNNN VYFFATNIDI RNNDDAAARI EVTRRSLKAL GLL
|
|---|
| |