Gene Ava_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0070 
Symbol 
ID3683482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp95040 
End bp95723 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content35% 
IMG OID637715397 
Producthypothetical protein 
Protein accessionYP_320591 
Protein GI75906295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0872353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00188887 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGATCGC CAAATTTTTA CACTTATGCT TTTTTAAATA CTCCTGATGT TCCTTTACGT 
CTACCATCTG GCAATCTAGG TCAATTACTC CTGATTAATG GCAATAATAT CTCAGCCGTC
GTAGAACCTG GAATATCCTT AGAATCTAGT CAAAATAATG ATGAAGAAGT TATTAAAATG
GTTTTAGCTC ACGATCGCGT CATTTGTGAG CTATCTCAGC AGACAACAGT TTTACCTTTG
CGTTTTGGCA CTTATTTCAA TTCCGAAGAG ACATTGCTAA ATCATATAGA GTCTCATGCT
CAAGAATATC AAAAGAAACT CGATAATATT CAAGGGAAAA CAGAATATAC TTTAAAGCTC
ATTCCTCGTA AATTTGAAGA ACTTGCCAAG ATATCAGGGG GACATGGAAG AGATTATTTT
TTGGCGAAAA AATTGCATTA TGAGCATCAA AAAAGCTTTA TTGGTGATCA AAATAGGGAG
AAACATCATC TGATCAATTT AATGATGGAT ATTTATCGCT CATCTGCAAT TATTCAAGAT
TATGTAGAAG AAGTACGTCT TCATCTTTTA GTTGATCGCC ATGATAAAGC TTTACTCTTC
AAACAAGTGT TAACGCTACA AGAGAAATGT CCTCATTGGA ATTTAATCTT GGGAGAACCA
CTACCACCCT ATCATTTTGT TTAA
 
Protein sequence
MRSPNFYTYA FLNTPDVPLR LPSGNLGQLL LINGNNISAV VEPGISLESS QNNDEEVIKM 
VLAHDRVICE LSQQTTVLPL RFGTYFNSEE TLLNHIESHA QEYQKKLDNI QGKTEYTLKL
IPRKFEELAK ISGGHGRDYF LAKKLHYEHQ KSFIGDQNRE KHHLINLMMD IYRSSAIIQD
YVEEVRLHLL VDRHDKALLF KQVLTLQEKC PHWNLILGEP LPPYHFV