| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2720 |
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| Symbol | |
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| ID | 3672785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2799650 |
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| End bp | 2801545 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637711427 |
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| Product | iron complex outermembrane recepter protein |
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| Protein accession | YP_316478 |
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| Protein GI | 74318738 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.83965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.415567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAAT CCCCCCTTGC GCTCGCCCTG GGCGTCGTTT TTTCATCGTT CGCGTATGCC
GAAGCCCTGC CTGAATTCGT CGGCGAAACC ATTGTCGTTA CGCCGACGCG CACGGCGTGT
ACAACGGATG AAACGCTGGC CGCAACCACG GTGATTACGC GCAGCGACAT CGAACGCAGC
CAGGCCAGCG ATCTGATGAC GTTGCTCGGT CAGCAGGCAG GCATCAATGT TGCCCGCACC
GGGGGGGAGG GCAAGAATAC CGCCGTCTAT GTGCGCGGCA CCGCCGCCAA GCATGTTCTC
GTGCTGGTGG ACGGGGTGCG TGCCGCTTCC GCGACCACCG GCACGTACGA CTGGAATGCC
CTTGCGCCGG AACAGATCGA ACGCATCGAA ATCGTGCGCG GCCCTTTCTC CAGTCTGTAC
GGTTCCGACG CCGTTGGTGG GGTGATCCAG ATTTTCACCC GTCGCGCCGC CGGTCCCGGC
GTCAAGCTGA CGGCGGGCAG TCGCGGCACC CGCGCCCTCG GTTTCAGCCT CGGCGGCGGC
GATGCCTGGC GCTACAGCGT GGAAGCCGGG CGCGAAAGCA CGGACGGCCT GCCCACCTTT
TCCGACAGCA GCACGGCTTA TGGCTTCAAT CGCAATCATC TGTCGATGGG CGTCGACGGC
CGCCTGACGC CCGATCTGGC GCTTGTCGCC AGGCTTGCCC AGTCCTGGGG GCGCAACGAG
CTTGATATCG CCACCGGCGA CAACGATTAC AAGAACCGCA CCGCCAGCCT CAAGTTCGAC
CACCAGGCCG GCGCGCAATG GCGGCAGAGC CTGACCCTCG GCAACGCGCT GGACAGCTAC
ACGTCATACA GCCCCTACGT GCCTGCTCGC ATCGAGACCC GCCGCAACAG CCTGTCCTGG
CAACACGATC TCTCGTTCGA GCCGGGACAG CTCAGCCTGG GTCTCGACTA CTGGAAGGAT
CACGCCAGCA AGGACAATAG CGGCCAGATC GACGAGCGCC TCGAAAACAC CGGGCTGTTC
GCGCAATACC GTTTTGCCGC CCTGGGCGGC GAAGCGCAGG CGGGTGCGCG CCGCGACAAG
CACGAGGCTT TCGGCAGCCA GGACACCTGG AACCTGCGCT GGGGCCGCGA ACTGGCGCCG
GGTCTGCGTA TCACGGCCGG GCATGGCACC GCCTTCAAGG CGCCCACCGT CAACGACCTG
TACTGGCCCG CCAGCAGCAA CGGCCCCTAC ACTTACACCG TTGACGGCGT CACTTACAGC
GACACCTACA ATTCGGGCGG CAACCCGGAC CTTAGGCCGG AAACCTCGCG CACCACCGAA
CTGGGCCTGA GTTACCTGCA GGCTGGCTGG GGTGCAGAAG TGCACCTGTA TGAAACGCGG
GTGGATGACC TGATCGAGTG GAAGCCGACT GTCGTTCCCG GCGGCACGGG GCCGGGCGGG
GAAATCCTGA CGACCTACGA CTGGCAGCCG GAAAACGTCA GTTCGGCGCG GATGCGCGGC
CTGGAACTCG GTGGGCATGC GCGCTGGCTG GAGTGGGCCT GGCGCGCTGA TCTGGCACGC
GTGCTGGCGG TCAACCTCGA TACCGGCCGC CAGCTCGACC GGCGTCCGGA AAACAGTCTC
ACGCTCAGCG CCGCGCGTAC GTTTGGCCGC CATGGCCTGC GCATCGAAGG CAGCGCCTAT
TCACGGCGTC TGGACGTGAA CGGAGCGAAA CAACTGGCCG GCTACGGCCT GGTCAACGTC
GCCTACGAAT ACACGCTGAA CAAGGACACC CGGCTCGGGG TCCGCATCGA CAACCTGCTC
GACAAGGACT ACGCGCTGGC GCGAACCAAT ACGCGCTTCT ACGAGACGCC GGGGCGTAGC
GTGTTCGTGA GCTTGCGTTA CCAGCCGGGC AAGTAA
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| Protein sequence | MRQSPLALAL GVVFSSFAYA EALPEFVGET IVVTPTRTAC TTDETLAATT VITRSDIERS
QASDLMTLLG QQAGINVART GGEGKNTAVY VRGTAAKHVL VLVDGVRAAS ATTGTYDWNA
LAPEQIERIE IVRGPFSSLY GSDAVGGVIQ IFTRRAAGPG VKLTAGSRGT RALGFSLGGG
DAWRYSVEAG RESTDGLPTF SDSSTAYGFN RNHLSMGVDG RLTPDLALVA RLAQSWGRNE
LDIATGDNDY KNRTASLKFD HQAGAQWRQS LTLGNALDSY TSYSPYVPAR IETRRNSLSW
QHDLSFEPGQ LSLGLDYWKD HASKDNSGQI DERLENTGLF AQYRFAALGG EAQAGARRDK
HEAFGSQDTW NLRWGRELAP GLRITAGHGT AFKAPTVNDL YWPASSNGPY TYTVDGVTYS
DTYNSGGNPD LRPETSRTTE LGLSYLQAGW GAEVHLYETR VDDLIEWKPT VVPGGTGPGG
EILTTYDWQP ENVSSARMRG LELGGHARWL EWAWRADLAR VLAVNLDTGR QLDRRPENSL
TLSAARTFGR HGLRIEGSAY SRRLDVNGAK QLAGYGLVNV AYEYTLNKDT RLGVRIDNLL
DKDYALARTN TRFYETPGRS VFVSLRYQPG K
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