| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1746 |
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| Symbol | |
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| ID | 3671331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1833978 |
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| End bp | 1837082 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710438 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_315504 |
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| Protein GI | 74317764 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.787262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAAGA CCCTCATTCA GGCCAGCCTC AGACAGCGCC TTTTCGTCGT CGCAGCGTCG
CTGCTGCTGC TCGTCTACGG CATGCTCACG CTCAAGCAGT TGCCGGTCGA CGTGTTCCCC
GACCTCAACA AGCCCACCGT CACGCTCATG ACCGAAGCCG AGGGCATGGC GCCCGAGGAG
GTCGAGCAAC TCATCAGCTT TCCGGTCGAG ACCGCGATGA ACGGCATCCC GGGCGTCACG
CGCGTGCGCT CGGTCTCGGG CATCGGCCTG TCGATCGTCT ACGTCGAGTT CGACTGGGGT
ACCGACATCT ACCGCAACCG CCAGCAGATC GCCGAGCGCC TGTCCCTGGT CAAGGAGCAG
CTGCCCGCCG GGGTCACGCC GCAGATGGGG CCGATCAGTT CGATCATGGG CGAGATCATG
CTGATCGCGA TGACCGCCGA CCCGACGCGG GCGAATCCGA TGCAGGTGCG CGAACTGGCG
GACTGGGTCG TGCGCCCGCG GCTGCTGACG ATTCCCGGCG TGTCGCAGGT GATTCCGATC
GGCGGCGAGG TCAAGCAATA CCGGGTGACG CCCGATCCGG TCGCGCTCGA TCGCCTCGGC
GTCACGCTCG AACAGATCGA GCGGGCGATG GCGAATTTTG CGACCAATAC GAGCGGCGGC
TTTCTCGAAT CGCAGGCGCA GGAATACCTG ATTCGCAATA TCGGGCGCAC GACCCGGCTC
GAAGACCTGA AGGGCCTGGT GATCGACTAC CGCGGCGGCA TCCCGGTCGT GCTCGAACAG
GTCGCCCGGG TCGACTTCGC GGCCCGCCTC AAGCGCGGCG ACGCGAGCTT CATGGGCAAG
CCCGCGGTCA TCCTGTCGGT GCAGAAGCAG CCGGGCGCCG ATACGGTCAA GCTCACCCGC
GAAATCGAGG CCGCGCTCGG CGAACTGAAC AAGAACATGC CGGCGGGGAT TGCGGCGAAA
GACATCCTGT TCAAGCAGGC GAATTTCATC GAAAGCTCGG TGAGCAACGT CGAGGAAGCC
CTGCGCGACG GCGCGATCAT GGTCGCTGTC GTGCTGTTCC TGTTCCTGCT CAATTTCCGC
ACCACCTTCA TTTCGCTGAC CGCGATCCCG ATCTCGATTC TGATCACAGT GCTCGTCTTC
AAGTATTTCG GGCTGTCGAT CAACACGATG ACGCTGGGCG GGCTCGCGAT CGCGATCGGC
GAACTCGTCG ACGACGCGGT CGTCGGCGTC GAGAACGTGT TCCGTCGCCT CAAGCAGAAT
CGCGCCGAGG GCGACAGGAT TCCGGTGCTC GACGTCATCG CCGCGGCGAC GCTCGAAGTG
CGCTCGGCGA TCGTCTACGC GACGCTGATC ATCGTGCTCG TGTTCGTGCC GCTGTTCGTC
CTGTCCGGCA TCGAGGGCCG CCTGTTCGCG CCGCTCGGCG TCGCCTACAT CGTCTCGATT
TTGGCGAGCA TGCTCGTGTC GGTCACGCTG ACCCCGGTGC TGTGCTACTA CCTGCTGCCG
AAGATGAAGC GCCTCGAGCA CGCGGACAGC CCCGTGGTCG CCAAACTCAA GCACTGGGAC
ACGGGCCTGC TGCGCTGGTC GTTCGACCAC GCCAAGTTCG TGCTCGGCGG CGGCCTGCTC
GCCGTGGCGC TCGCGGCGGC GGCGGTGCCG TTCTTCCCGC GATCCTTCCT GCCCGCGTTC
AACGAAGGCA CGCTCACGAT CTCGGTCGTC ATGAACCCGG GGACCTCGCT ATCCGAGGCC
AACCGCATCG GCACCCTGGC GGAGCAGCTG ATCCTGCAGG TACCCGAAGT GACCCAGGTC
GGGCGGCGAA CGGGCCGCGC CGAACTCGAC GAGCACGCGG AGGGCGTGCA CTACAGCGAG
ATCGACGCCG ATCTGAAAGA ATCCGCGCGC TCCCGTGACA CCGTGTTGCA GGACATTCGT
ACCCGCCTTG CGGCGCTGCC GGCTTCGGTC AACACCGGCC AACCGATCTC GCACCGGCTC
GACCACATGC TGTCCGGCGT GCGCGCGCAA ATCGTGCTCA AGATCTTCGG CGACGACGTC
GACACGCTGC GCGGCGTTGC CGCGGATCTG CAGACGCGGC TCGCCAAAAT ACCGGGGCTG
GTCGACCTGC AGCTCGAAAA ACAGGTGCGC ATCCCGCAGC TGCAGATCCG CGTGGATTAC
GCCAAGGCCA GGCAGTACGG TGTCACGCCC GCGGCGATCA ACACCGCGCT CGAGACGCTT
TCGAACGGCG CGACGGTCGC GCAGGTCATC GAAGGCAGCC GCCGCTTCGA CGTCGTGATC
CGCCTCGACG ATGCCGATCG CGGCGCGCAG GGCCTGAGCC GCCTGCTGGT GGAAACGCCG
AGCGGACGCA TCCCGCTCGG CCTCATCGCC GAAATCGACG ACAGCGACGG GCCGAACCAG
ATCCTGCGCG AGAACAGCCG CCGCCGCATG GTGCTGATGG CGAACAGCGA CGGCACCGAC
ATGGCGCAGA TCGTCCGCGA CATTCGCGCC GAGCTCGCCC GCTATCCGCT GCAGGAGGGC
TACTTCACCC AGCTCGAAGG CCAGTTCCAG GCGCAGGAAG AAGCCAGCCG GCTGATTACC
GGGCTTTCGC TGGTGTCGCT CGCGATGATC TTTCTGGTTC TGTACAGCCG CTACAAGTCG
GCGGTGCTGT CGCTGATGAT CATGGGCAAC ATTCCGCTCG CGCTGGTCGG CAGCGTCATC
GCCTTGTGGA TGTCGGGCGG CGCGCTGTCG GTCGCGAGCC TGGTCGGCTT CATCACGCTG
GCGGGCATCA GTACGCGCAA CGGCATCCTG AAAATCAGCC ACTACATCAA CCTCGTTGCG
CACGAGGGCG AGAACTTCGA CCGGAAAATG ATCATTCGCG GCAGCCTCGA ACGCCTGACA
CCCGTGCTCA TGACCGCGCT GGTCGCGGCC TTCGCGCTGA TTCCGCTGCT GTTGTCGGGC
GGCGATCCCG GCAAGGAAAT CCTGCACCCG GTCGCGGTCG TGATTTTCGG CGGGCTCGTG
AGTTCCACGC TGCTCGATAC GATTCTGACG CCCGTGATGT TCTATTTGTG GGGCGAAAAA
CCCACGCGCA AACTCATCGC CGAGGGCGCG AAGGAAAACT TCTGA
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| Protein sequence | MFKTLIQASL RQRLFVVAAS LLLLVYGMLT LKQLPVDVFP DLNKPTVTLM TEAEGMAPEE
VEQLISFPVE TAMNGIPGVT RVRSVSGIGL SIVYVEFDWG TDIYRNRQQI AERLSLVKEQ
LPAGVTPQMG PISSIMGEIM LIAMTADPTR ANPMQVRELA DWVVRPRLLT IPGVSQVIPI
GGEVKQYRVT PDPVALDRLG VTLEQIERAM ANFATNTSGG FLESQAQEYL IRNIGRTTRL
EDLKGLVIDY RGGIPVVLEQ VARVDFAARL KRGDASFMGK PAVILSVQKQ PGADTVKLTR
EIEAALGELN KNMPAGIAAK DILFKQANFI ESSVSNVEEA LRDGAIMVAV VLFLFLLNFR
TTFISLTAIP ISILITVLVF KYFGLSINTM TLGGLAIAIG ELVDDAVVGV ENVFRRLKQN
RAEGDRIPVL DVIAAATLEV RSAIVYATLI IVLVFVPLFV LSGIEGRLFA PLGVAYIVSI
LASMLVSVTL TPVLCYYLLP KMKRLEHADS PVVAKLKHWD TGLLRWSFDH AKFVLGGGLL
AVALAAAAVP FFPRSFLPAF NEGTLTISVV MNPGTSLSEA NRIGTLAEQL ILQVPEVTQV
GRRTGRAELD EHAEGVHYSE IDADLKESAR SRDTVLQDIR TRLAALPASV NTGQPISHRL
DHMLSGVRAQ IVLKIFGDDV DTLRGVAADL QTRLAKIPGL VDLQLEKQVR IPQLQIRVDY
AKARQYGVTP AAINTALETL SNGATVAQVI EGSRRFDVVI RLDDADRGAQ GLSRLLVETP
SGRIPLGLIA EIDDSDGPNQ ILRENSRRRM VLMANSDGTD MAQIVRDIRA ELARYPLQEG
YFTQLEGQFQ AQEEASRLIT GLSLVSLAMI FLVLYSRYKS AVLSLMIMGN IPLALVGSVI
ALWMSGGALS VASLVGFITL AGISTRNGIL KISHYINLVA HEGENFDRKM IIRGSLERLT
PVLMTALVAA FALIPLLLSG GDPGKEILHP VAVVIFGGLV SSTLLDTILT PVMFYLWGEK
PTRKLIAEGA KENF
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