Gene Tbd_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1661 
Symbol 
ID3673046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1745848 
End bp1746822 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID637710348 
Producthypothetical protein 
Protein accessionYP_315419 
Protein GI74317679 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.8813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGG GGCGTAGAGG CGCCTTGACG CGCGCGTGGG CCCGCGGGCG GGCGATCGCT 
AGCCGTATCC TGCCGATGCT CGCTTGCGCC TGGCTCGTGG CGTTTTCGAG CCCCGCCGCC
GCGGCGCGCG TCGTCGTCGT ATTGAGCGAC GACTCGGCGC CGTATCAGGA GGTCTATCAG
ATCATCCGCG GCTATCTGGA TCACGGGCGG CATGAGACGG GCAGGGCTTA CGCCGACGGC
CTCAGCGCCT CGGCGCTGGA TGGCGCGCGC CTCGTCGTCA CGGTCGGCGT GCGTGCGGCC
GAATCGCTCG CGACGCAGCC GGTGCGCAAT CCGGTGCTCG CGGTTCTGGT GCCGCGTGCG
TGGTACCTCG AGAGCGGCCG CGCGGAGCTC GCTGGGGAAG GCAAGCGCGC AGTATCGGCC
ATCTATCTCG ACCAGCCGTT CCAGCGCCAG GCCCAACTGA TCCGTCTGGC CTTTCCCGAG
ATGACACGCG TCGGCGTGCT GTTGAGCACG AATCAGCGCC AGGTCCTGGG CGAACTCGCG
GACGCCCTGC GGGCGCAGGG AATCAGCCTG GTGTACGGCC TGCTGAGCGG AGCGGACCGC
CAGATCGCGC AGCTCGAGGC GGTCCTGTCC GAGGCCGAAT TGCTGCTCGC GATCCCGGAC
CCCGGGGTCA TCAACCGCAA CACTGCGCAA AGCCTGCTGC TGACCTCGTA TCGCTACCGC
GACCCGGTGC TCGGCTATTC GCGCTCGCTG ACGCGCGCCG GCGCCCTCTT GTCGCTGCAC
TCGAGCCCGG CGCAAATCGG CCGCCAGGCC GCGGAATCGG TGCGGCGCGT GATCGAGACC
ACGTCTTCGC AACTTCCCGA ATCGACGTAT CCCGCTTATT TCAGCGTTTC GATCAACCGC
CAAGTCGCCC GTTCGCTCGG TTTCGTCCTG CCGCAGGAAA ACGAGCTGGA AAAGCGTCTG
GGAGAGGAAA TCTGA
 
Protein sequence
MPVGRRGALT RAWARGRAIA SRILPMLACA WLVAFSSPAA AARVVVVLSD DSAPYQEVYQ 
IIRGYLDHGR HETGRAYADG LSASALDGAR LVVTVGVRAA ESLATQPVRN PVLAVLVPRA
WYLESGRAEL AGEGKRAVSA IYLDQPFQRQ AQLIRLAFPE MTRVGVLLST NQRQVLGELA
DALRAQGISL VYGLLSGADR QIAQLEAVLS EAELLLAIPD PGVINRNTAQ SLLLTSYRYR
DPVLGYSRSL TRAGALLSLH SSPAQIGRQA AESVRRVIET TSSQLPESTY PAYFSVSINR
QVARSLGFVL PQENELEKRL GEEI