| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1190 |
|---|
| Symbol | |
|---|
| ID | 3671551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1251055 |
|---|
| End bp | 1251900 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637709874 |
|---|
| Product | ATP-binding ABC transporter protein |
|---|
| Protein accession | YP_314948 |
|---|
| Protein GI | 74317208 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.726252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGGC CGGATCAGCG GAGCGAGGCA GATCGGGCGT CTAGCACGCT GCTCGAGGTC
GAAGACCTGC ATTTCGCGTT CGATGGCAAA GCCGTTCTGA AGGGTGTTTC CCTCGCCATT
CCGCGCGGCA AGGTGGTCGC GATCCTCGGC GTCAGCGGTT GCGGCAAGAC GACGCTGCTC
AGGCACTTCG GCGGCCAGCT GCAGCCCGCG CGCGGGCGCG TGCGTTTCGA CGGGCAAGTC
GTTCACGAAC TCGACAACGC CGGTCTTTAC GCGATGCGAC GCAAGATGGG CATGATGTTC
CAGGTCAGCG GCCTGTTCAG CGACCTGTCG GTGTTCGACA ACATCGCCTA CCCGATGCGC
GAGCACACCG ACCTGCCTGA GGACGTCATC CACGACCTCG TCCTGATGAA GCTCCACGCC
GTCGGCCTGC GCGGCGCCTG TGCGCTGCGC ACGCGCGAGC TCTCGGGCGG AATGGAGCGG
CGCGTCGCGC TCGCGCGCGC GATTGCGCTC GACCCCATGC TCATCATGTA CGACGAGCCT
TTCGCCGGTC TCGATCCGAT CTCGCTCAAC ACGATCGGCG ACCTGATCCG CCGTCTGAAC
GACGCGCTCG GCCTGACGTC GATCTTCGTG ACCTACGACG TCTCGGAATC GCTCAAGGTC
GCCGACTACG TGTACTTCCT GCACGAGGGC GTGGTCGTGG CCGAAGGGGA GGCAGCGGGC
ATGATCGACT CCGACGATCC CTTCGTGCGC CAGTTCGTCC ATGCCGAGCC CGATGGCCCG
GTGCGCTTCC AGTATCCAAG CCGGCCCTAC CGCGACGAAC TCGAGCTCGG GACGGGCGAC
CGCTGA
|
|---|
| Protein sequence | MTRPDQRSEA DRASSTLLEV EDLHFAFDGK AVLKGVSLAI PRGKVVAILG VSGCGKTTLL
RHFGGQLQPA RGRVRFDGQV VHELDNAGLY AMRRKMGMMF QVSGLFSDLS VFDNIAYPMR
EHTDLPEDVI HDLVLMKLHA VGLRGACALR TRELSGGMER RVALARAIAL DPMLIMYDEP
FAGLDPISLN TIGDLIRRLN DALGLTSIFV TYDVSESLKV ADYVYFLHEG VVVAEGEAAG
MIDSDDPFVR QFVHAEPDGP VRFQYPSRPY RDELELGTGD R
|
|---|
| |