Gene Tbd_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0872 
Symbol 
ID3671637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp921602 
End bp923623 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content62% 
IMG OID637709551 
Productadenylylsulfate reductase subunit alpha 
Protein accessionYP_314630 
Protein GI74316890 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR02061] adenosine phosphosulphate reductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAG AATTTGGTAA TCCCGAAGTT GTCCAAGAGG ACGTCGACGT CCTTCTGATC 
GGTGGTGGCA TGGCATGCTG CGGCGCCGGT TACGAAATCA TGCGCTGGGC CGACGCCGCC
AAGGCGGAGC TGGGCATGGA CCTCAAGATC AAGCTGGTCG ACAAGGCCGC GATGGACCGT
TCCGGCGCCG TGGCGCAGGG CCTGTCCGCG ATCAACACCT ACATCGGTTC CGAGCAGGAT
CCCGCCGACT ATGCCCGCAT GGTCTCCAAC GACCTGATGG GCATCACCCG CGACGACCTG
GCCTACGACC TGGGCCGCAA CGTCGACGAT TCGGTGCACC TGTTCGAAGA ATGGGGCCTG
CCGATCTGGA AAACCGACGA AAACGGCGAG CGCCACGACG GCGCCCAGGG CCTGCCCGCG
CTGAAGGACG GCGGCAAGCC CGTACGTTCC GGCAAATGGC AGATCATGAT CAACGGCGAG
TCCTACAAAT GGATCGTTGC AGAAGCCACC AAAAAAGCGC TCGGCATGGA TCGCATCGAA
GAGCGCATCT TCATCGTCAA GCTGGTCAAC GACAAGAACG ACCCGAGCCG CATCGCCGGT
GCCGTCGGTT TCTCGACCCG CGACCACAAG GTCGTCGTCT ACAAGGCCAA GGCCATCCTG
CTGGCTGCCG GTGGCTGCGT GAACATCTTC CGCCCGCGCT CCGTCGGCGA AGGTACCGGC
CGTGCCTGGT ACCCGGTGTG GAACGCCGGC TCGACCTACG CCATGGCTGC CGAAGCCGGC
GCCGAGCTGA CGATGATGGA AAACCGTTTC GTTCCCGCCC GCTTCAAGGA CGGTTACGGC
CCGGTCGGCG CCTGGTTCCT GCTGTTCAAG GCCCAGGCCG TCAACGCCTA CGGCGAAGTC
TACATGCAGA AGAACAAGGA ACTGCTGAAC GACTACCCCC CCTACGGCCA GGCTGCGGTG
CCGGCCTCCT GTCTGCGCAA CCACCTGATG CTGAAGGAAA TGCAGGAAGG CCGCGGCCCC
ATCTACATGG ACACCGTGAC CGCGTTGGCG AAGCTGCGTG AAACCCTGAC CCCGCGCGAA
GTGAAGCACC TCGAGGCCGA AGCCTGGGAA GACTTCCTCG ACATGTGCGT CGGCCAGTGC
GGCATCTGGG TGGGCGAGAA CATCGAGCCG GAGAAGAAGA ACTCCGAATT GATGCCGACC
GAGCCCTACC TGCTGGGTTC CCACTCCGGC TGCTGCGGCA TCTGGGTGTC GGGCCCCGAG
GACGTCGGCG CTCCCACCGA CGAAGCCCAC GCCGATGCGG CCAAGATCCC GGCTCACTTG
CCCAAGGGCT GGAACTGGGG CTATCGCTCG ATGACCACGG TCAAGGGTCT GTTCACCGCC
GGCGACGGCG TGGGCGCATC CGGCCACAAG TTCTCCTCCG GCTCGCACGC CGAAGGTCGC
ATGTGCGCCA AGTCCATGGT CAAGTACTGC ATCGACAACA AGGACTGGAA GCCGGAACTC
GACACCCCCG TCGAGCAACT GGTGGAAGAG ATCTACAAGC CGGTGCGCAC CTTCCTCGAG
CACAAGGACT ACACCACGGC GATCGACGTC AACCCCAACT ACATCACCCC CAAGATGCTG
CAGTTCCGTC TGCAGAAAAT CATGGACGAG TATGTTGCCG GCGTCGCGAC CTACTACAAG
ACCAACGCCA ACATGCTGGC CGTGGCCGAA GACAAGCTCG GCATGCTGAA GGAAGACGCC
GAGAAGATGC GTGCGAAGGA CCTGCACGAG CTGCTGCGCG CGTGGGAAAA CTACCACCGC
ATCCTGACGG CCGAAGCCCA CATGAAGCAC ATCCAGTTCC GCGAAGAAAG CCGTTACCCC
GGCTTCTACT ACCGCATGGA CAAGAACTTC GTCGATGAGG AAAACTGGCA CTGCTTCGTG
AACTCGGTCT ACGACAAGAA CTCCAAGCAG TGGAACTGCT TCAAGCGTGC CCACGTGGAT
CTGGTCGACA AGTCCAAGCT GTTCAAGCCC GCTGCCCACT AA
 
Protein sequence
MAGEFGNPEV VQEDVDVLLI GGGMACCGAG YEIMRWADAA KAELGMDLKI KLVDKAAMDR 
SGAVAQGLSA INTYIGSEQD PADYARMVSN DLMGITRDDL AYDLGRNVDD SVHLFEEWGL
PIWKTDENGE RHDGAQGLPA LKDGGKPVRS GKWQIMINGE SYKWIVAEAT KKALGMDRIE
ERIFIVKLVN DKNDPSRIAG AVGFSTRDHK VVVYKAKAIL LAAGGCVNIF RPRSVGEGTG
RAWYPVWNAG STYAMAAEAG AELTMMENRF VPARFKDGYG PVGAWFLLFK AQAVNAYGEV
YMQKNKELLN DYPPYGQAAV PASCLRNHLM LKEMQEGRGP IYMDTVTALA KLRETLTPRE
VKHLEAEAWE DFLDMCVGQC GIWVGENIEP EKKNSELMPT EPYLLGSHSG CCGIWVSGPE
DVGAPTDEAH ADAAKIPAHL PKGWNWGYRS MTTVKGLFTA GDGVGASGHK FSSGSHAEGR
MCAKSMVKYC IDNKDWKPEL DTPVEQLVEE IYKPVRTFLE HKDYTTAIDV NPNYITPKML
QFRLQKIMDE YVAGVATYYK TNANMLAVAE DKLGMLKEDA EKMRAKDLHE LLRAWENYHR
ILTAEAHMKH IQFREESRYP GFYYRMDKNF VDEENWHCFV NSVYDKNSKQ WNCFKRAHVD
LVDKSKLFKP AAH