Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0658 |
Symbol | |
ID | 3672623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 698676 |
End bp | 699311 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637709330 |
Product | ribosomal large subunit pseudouridine synthase A |
Protein accession | YP_314416 |
Protein GI | 74316676 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATCG ATCCCCTTTA CGCTGACGAC TGTCTGCTCG TGTTCGACAA GCCGAGCGGC CTGCTCGCGG TGCCCGGGCG CGGCCCCGAC AAGCAGGATT GCCTCGCGGC GCGCGCGCAG GCCTGTTACC CGGACGCCCT CGTCGTGCAT CGCCTGGACA TGGCGACCTC CGGCCTGATG GTCATGGCGC GCGGCACGTA CGCCCAGCGT GCATTGAGCA GGGCGTTCGC CGCGCGCGAG GTCGAGAAGC GTTACGTCGC GGTCGTCGCC GGGCATCCCG CCGCGCCGCA AGGAGCCTGG GGCACGATAG ACCTGCCGCT CGTCGTCGAC TGGCCCAACC GACCGCTGCG CATCGTCGAC GCGGTGCGCG GCAAACCGAG CGTGACGCGC TGGCGCGTGC TCGGGCCTGC CGGTGCGGAC GGGACGCGTG TCGAACTCGA GCCCGTGACC GGGCGCTCGC ACCAGTTGCG CGTGCATCTG CGCGAAATCG GCCACCCCAT CCTCGGCGAC GCGCTCTACG CACCGCCCGC AGTGCAGGCG CAGGCCTCGC GGCTGCTCCT GCATGCCCGC TCGCTCGGCC TCGCTCACCC GGCGACCGGG GAATGGATGC GGTTCGAGGC GCCGCAGCCC TTCTGA
|
Protein sequence | MTIDPLYADD CLLVFDKPSG LLAVPGRGPD KQDCLAARAQ ACYPDALVVH RLDMATSGLM VMARGTYAQR ALSRAFAARE VEKRYVAVVA GHPAAPQGAW GTIDLPLVVD WPNRPLRIVD AVRGKPSVTR WRVLGPAGAD GTRVELEPVT GRSHQLRVHL REIGHPILGD ALYAPPAVQA QASRLLLHAR SLGLAHPATG EWMRFEAPQP F
|
| |