Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0568 |
Symbol | |
ID | 3673678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 595820 |
End bp | 597376 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637709239 |
Product | M48 family peptidase |
Protein accession | YP_314326 |
Protein GI | 74316586 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.017113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGGGAA CCTTGTGTCG ATTCACGAAT CGTAAACCAA ATGTCTACTC CCGCCTCGAC TTTGGCCCGC GTGCGCTGCT GATGCTGCGA TTGCTGCTCG CCATGCTGTT GGCGGCCCAA CCCGCCGCTG CCGTCGACCT GCCCGAACTT GGGGAAGTGT CGCGTCAATA CTTTTCCGAT CAGGAGGAAC AGGCGCTGGG ACGCGCGATC ATGCGCGACG TCTACGTCGA CCCGCGCTAC CTCGACGATC CCGAGATCGA AACCTACCTC GGCCAACTCG GCTACAAGCT CGTTTCCGTC AGCACGCGCA ATCAACGCGA ATTCAACTTC TTCGTCGTCG ACGACCCGAG CATCAATGCC TTCGCGATGC CGGGCGGCAA CGTCGGCGTG CACACCGGGC TGCTGCTCGC GGCGCAAAGC GAATCCGAAC TCGCCGGCGT GATCGCCCAC GAAATCGCCC ACGTGACCCA GGACCATATC GCGCGGATGG TCGCGGCGCA GAGCCAGAGC CAGTGGCCGA CGCTGGCGGC GCTTGCGCTT GCCCTGCTCG CGTCCCGTTC CAACCCGAAT ATCGCGAGCG CGGCGATCGC GTCGAGCCAG GCCTACTCCA TCCAGAACCA GCTCAACTAC AGCCGGGACT ACGAGCGTGA AGCCGATCGC CTGGGCTACG ACATGCTGAC CCGCGCGGAC TACGACGCGC GCGGAATGAG CGGCTTCTTC AATCGGCTGC AGCGTGCGAA CCGCTTCTAC GACAGCAGCG CGCCGGCCTA TCTGCGCACG CACCCGCTCA CGACCGAGCG TATCGCCGAC ATGGAGGCGC GCAGCGAGGC GGCGCCCTAT CACCAGAAAG AGGACAGCCT CGACTTCCAG CTGGTGCGCG CGCGCCTGCG CGCCCGCGAG GGCAGCCCGC AGGACGCCGT GCTCGCGGCG CGCGCCGCGC TGAAGGAAAA ACGCCACAGC AGCGCGGTGG CCGCGCGTTA CGGCCTGGTC GTGGCGCTCA TGCGCGCGCG CCAATTCAAA GACGCGGAGC GCGAGGCGCA AACCCTGCTC GGCGGGGCGA CGGCACATCC GATGGTCACG CAAGTCGCCG CCCAATCCGC ACTTGCCGCG GGCAACCCGG CACTCGCGCT GCAGCGCTAC GAGGCAGGTA CCGCCGCCTT CCCGGGATAC CGGCCGCTGC AGTACGGCTA TGTCCGTGCA CTGCTCGACG CGCGGAAAAA CAAGGATGCG TTGCGTCAGG TCGACACACA GCTCGCCCTG TATCCTCTTG ACCGCCGCTT GTGGCGACAG GCCGCCGAAG TGCACGCACG TCTGGGGCAT CGCCTGCTGA GCCATCAGGC GATGGCCGAA TCGCTCGCGC TCGGGGGCAA CCTGGTCGGC GCGATCGAGC AGGTCTCGCT CGGCATCAAG GCCGGCGACG GCAGCTTTCA TGAACTCTCG GCCGCCGAAG CAAAGCGCCG CGAGTGGCAG GAAGCCGAAA AGGCGCAGCG CAAAGACGGC CAGCCGGCGG GGTCTTCGCG CGCGTTCGAT GCTGGTAGGA AATTACCTCG AGAATAG
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Protein sequence | MLGTLCRFTN RKPNVYSRLD FGPRALLMLR LLLAMLLAAQ PAAAVDLPEL GEVSRQYFSD QEEQALGRAI MRDVYVDPRY LDDPEIETYL GQLGYKLVSV STRNQREFNF FVVDDPSINA FAMPGGNVGV HTGLLLAAQS ESELAGVIAH EIAHVTQDHI ARMVAAQSQS QWPTLAALAL ALLASRSNPN IASAAIASSQ AYSIQNQLNY SRDYEREADR LGYDMLTRAD YDARGMSGFF NRLQRANRFY DSSAPAYLRT HPLTTERIAD MEARSEAAPY HQKEDSLDFQ LVRARLRARE GSPQDAVLAA RAALKEKRHS SAVAARYGLV VALMRARQFK DAEREAQTLL GGATAHPMVT QVAAQSALAA GNPALALQRY EAGTAAFPGY RPLQYGYVRA LLDARKNKDA LRQVDTQLAL YPLDRRLWRQ AAEVHARLGH RLLSHQAMAE SLALGGNLVG AIEQVSLGIK AGDGSFHELS AAEAKRREWQ EAEKAQRKDG QPAGSSRAFD AGRKLPRE
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