Gene Tbd_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0525 
Symbol 
ID3673159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp552907 
End bp553491 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content66% 
IMG OID637709196 
Productpeptidase S16 
Protein accessionYP_314283 
Protein GI74316543 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.198265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAAG CAGGGCTGCC TCTGTTTCCG CTCAACACCC TGGTCTTTCC GGGCGGGCGG 
CTGCCGCTGC GGGTGTTCGA GCAGCGCTAT ATCGACATGG TCAAGCGCGC GATCGCGGAG
GACTCTGTCT TCGGCATCTG CGCGATCCGA GAGGGGCGGG AAACCGGAAC GCCTGCCGTG
CCCTACCCGG TCGGCACGGT CGTGCGGATC ACCGAGTGGG ACATGCCCGA GGCCGGCATT
TTCCATATCG AGACGCAGGC CGCACACCGT TTCGTCATCC GCCGCAGCGC CGTCGAGCCG
GATGGGCTGC TCGTGGCGAG CGTCGAGGAC GTGAGTGCCG AGCCGCCCAC CGCGGTTCCC
GACGAGCTCG GCCTGGCGGT TGAAATCCTG CGCCACATCG TGGATGAGTA CGGCGACGCA
CGCTTCCCTG CGCCGCACGC CTACGACGAC GCGGTCTGGG TCAGCTACCG GCTGTCGGAG
GTCCTTCCGC TGAAACTCAG CGTGAAGCAG AACCTGCTCG AAATGAACGA CAGCGTCACG
CGCCTGCGCA TCCTCAACGA GTTTCTCAAG CGGCAGATCA ACTGA
 
Protein sequence
MAQAGLPLFP LNTLVFPGGR LPLRVFEQRY IDMVKRAIAE DSVFGICAIR EGRETGTPAV 
PYPVGTVVRI TEWDMPEAGI FHIETQAAHR FVIRRSAVEP DGLLVASVED VSAEPPTAVP
DELGLAVEIL RHIVDEYGDA RFPAPHAYDD AVWVSYRLSE VLPLKLSVKQ NLLEMNDSVT
RLRILNEFLK RQIN