Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3464 |
Symbol | |
ID | 3626437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4444226 |
End bp | 4444717 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637702293 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_306917 |
Protein GI | 73670902 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00420636 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGAAA AGATTCGACA TATACTGGAA ATTCTTGAGA ATGATGCACG AACGAGTCCA GAAGAAATAG CATCCCTTAC AGATATGTCT GCACAGGATG TTTCCCAGAC GATTGCAAAA CTTGAAGAGA CGGGAGTTAT CCGGCACTAC AAAACCATCG TTGATTGGGA TCTGGTCGGG GAAAACGATG TTTATGCCGT TATTGAGCTG AAGGTTACTC TCGAGCGCAA TCAGGGCTAT CAGGCAATTG CAGAAAGAAT CTACAAGTTT CCGGAAGTCA GGTCAGTTAG GCTCTTATCT GGAAATTACG ACATATCCCT TACTGTCCGA GGAAAATCGA TGAAGGACGT GGCTTTTTTC GTAGCAGAGA AAATTGCAAC CCTTGATCAG GTACAGAGCA CTTCAACCCA CTTCGTACTG AAAACGTATA AAGAAGATGG GGTCATCCTT CATGAACCTG AAACGATTCA AAGGCTACCG GTATCATTTT GA
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Protein sequence | MDEKIRHILE ILENDARTSP EEIASLTDMS AQDVSQTIAK LEETGVIRHY KTIVDWDLVG ENDVYAVIEL KVTLERNQGY QAIAERIYKF PEVRSVRLLS GNYDISLTVR GKSMKDVAFF VAEKIATLDQ VQSTSTHFVL KTYKEDGVIL HEPETIQRLP VSF
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