Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2765 |
Symbol | |
ID | 3625093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3513015 |
End bp | 3514118 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637701617 |
Product | DNA polymerase IV |
Protein accession | YP_306247 |
Protein GI | 73670232 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0953517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTATCT CCAGTTCGAA AATAAATCCT CCTGAAAGGC GAATTACCTT CCACGCAGAT ACGGACAGTT TCTTTGCATC AGTTGAGGTA AGGGAAAGGC CGGAACTGAA AGGGCTGCCT GTAGTTGTGG GCTCTGACCC GAAAGGAGGT TCAGGAAGGG GAGTTGTAAG CACTTGCTCG TACGAAGCGC GGAAATACGG TATTCACTCG GCAATGCCCA TCTCACAGGC TTACAAACTC TGTCCTGATG CGGTTTTTTT GCCTGTAAAC ATGAAACTCT ACGCGGGCGT TTCGACAAAA ATAATGGAAC TTTTGAAGGG ATTTGCAGAC AGGTTTCAGC AGGTCAGCGT GGATGAAGCC TATCTTGTAC CAGGACCCGA AATCACGAAT TTTGAAGAAG CTGCCCTTTA TGCCCTCAGT ATCAAGGATA AAGTAAAGGA ACAGGAAGGA ATTACCTGTT CAGTTGGAAT CGGGCCAAAC AAATTAATCG CAAAAGTCGC GTCTGGTTTC CAGAAGCCTG ATGGGCTTAC CGTCGTCAGT CCTGAAGATG TAAGGAAATT TCTATTTCCG CTGCCGGTTT CAAAAATTCC AGGAATAGGG GACAAAACGG CTGAGACGCT GAAATCAATG GGCTTAAACA GAGTAGAAGA ACTTGCAAAC TTTGATGTAC AGTTGCTTTC TGGAAAGTTC GGTAAAATGG GGTTCCGCAT GAAGCAACTG GCAAACGGGC TTGATTTTGG GGAGGTTCGG GAAAAAGAAA GTGTAAAATC AATTAGCAGG CATGGAACCT TTGCTGAAGA CACCAGTGAC CCTGTAAAAA TCACCGGGTC TCTTGACCTG CTTGCTGAAA GTGTGCATAG TTCTCTCCTC AAAAACAAGC TTCTTTTCAA AACCGTAGTC CTCACCGTGC GTTTCGAGGA TTTCTCTACT TATACACGCT CAAAAACTAT CTCAATCTGG ACTTCGGACA TCTTTGTGAT CAAAAGAACA GCCATGCAGC TTCTCTCCGA ATTCATAGGA AAGCAAAAAC TCAGGCTAGT AGGCATAGAA GTCACCAAAC TTCGCGAAAG GGATGAAAAT CAAACCCTGA TAACAGACTT TTAA
|
Protein sequence | MPISSSKINP PERRITFHAD TDSFFASVEV RERPELKGLP VVVGSDPKGG SGRGVVSTCS YEARKYGIHS AMPISQAYKL CPDAVFLPVN MKLYAGVSTK IMELLKGFAD RFQQVSVDEA YLVPGPEITN FEEAALYALS IKDKVKEQEG ITCSVGIGPN KLIAKVASGF QKPDGLTVVS PEDVRKFLFP LPVSKIPGIG DKTAETLKSM GLNRVEELAN FDVQLLSGKF GKMGFRMKQL ANGLDFGEVR EKESVKSISR HGTFAEDTSD PVKITGSLDL LAESVHSSLL KNKLLFKTVV LTVRFEDFST YTRSKTISIW TSDIFVIKRT AMQLLSEFIG KQKLRLVGIE VTKLRERDEN QTLITDF
|
| |