Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2680 |
Symbol | |
ID | 3624790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3393252 |
End bp | 3395912 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701534 |
Product | sensory transduction histidine kinase |
Protein accession | YP_306164 |
Protein GI | 73670149 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.284871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0837353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAGA AGAATATGAA AAATGGTAGT ATAGATCAGA AATCGCAGGG GGGCGAAGAG CTCTACAGGA TGATATTCGA TCATAGCATG GATGGTATTA TCCTGACCGA TCCAAGAGAT GATGGGAAAA TCCTATTAGC TAATCCAGCA GCTTGCCGTA TGCTCGGATG GACGGAAGAA GAGCTTGTTG GCAAAGAATG CGATGAAATT TTAGATCTGC AAGAACCGAA GCTATCAGTT TTATTGGATG AACGTCCTCA CTCTGGATCA GCAAGAACTC AGCTTACTTA CAGGCGCAAG GATGGAACTA CATTCCTTGG AGAGGTAAGC ACTGGTTTCT TTACGAATAG CAATGGGGAG CCTCGAACAG TCACTATCAT CCGATATATC ACTGAGCGAA AGAAAGCTGT AGAGGCACTG TTAGAGAGTG AAAGCCGATA TAAGGCAATA TTTGATAATA GTCTTGATGG CATTTTTGTT ACAATTCCAG ATGGGACTAT TCTTGCAGCC AATCCAGCCG CTTGCCAAAT GTTTGGGATG ACAGAAGAGG AGCTTATCTT GGCTGGAAGA AACGGTACTG TGGATACATC TGATCCAAGG CTTAAGTCTG TCCTGGATGA AAGAGCCAGG AATGGCAGGT TTAAGGGAGA ACTTAATCAC AAACGGAAAG ATGGTACTAT CTTCCCAAGT GAGATATCGA GTACATTATT CAAAGATAAA AATGGCCTTA CAAAAGTTGT CATGGTTATT AGGGATATCT CTGAGCGAAA GAAGGCTGAA AAGAAGTTGC GGGAAAGCGA GGAAAGACTA CGCCTTTTGG GCGATAACCT GCCAGACAGC GCAGTCTATC AATATGCCCA CGAGCTCGAC GGCAGTGTCC ATTTCCTGTA CTTCAGCGCA GGTATCGAGA AGCTCAACGG CGTCAAAGTA TCAGATGTGC TTCGCGATCC GGGCACGCTA CACCGGCAAA TCCCACCTGA TTATTTCGCA CGACTCGTCG AAGCTGAGGC ACGCAGTGCC CGCGAGCTGT CTGACTTTAA TATGGAAACA CCTATGCGGC TTCCCGATGG CCAGGTTAAG TGGATGCGAT TGCATTCCCG TCCTCGCCGG CTGCCTGATG GCCGAACGGT GTGGGATGGA GTGCAAACCG ATATCACTGA GCTTAAACGG GTTGAGGAGA TGCTGCGCGA GACTGAATTG AGCTGGAAGG TTGCTGAAGC TGTCGAGTCT GAACGGCAGC GACTCTTTGA TGTGCTGGAA ACACTGCCGG TAATGATATG CCTGTTAACA CTTGACCATC ACATTGCCTT TGCCAATCGC AGTTTCCGTG AAAAGTTCGG CGAGTCAGAA GGTCGGCACT GTTATGAACG TTGTTTTGGG AGTAACCAGC CTTGTGAGTT ATGTGAATCG TACAAAGTGC TTGAAACCGG TCAGTCCCAT CAATGGGAAG TTACCACTCC AGAAGGAAGC GTGATTGATA TCTACAGTTT TCCCTTTACT GATGTTGATG GTTCTCCCAT GATCCTCAAG ATGGACATTG ACGTTACCGA GAGGAAACAA GCAGAAGAAA AACTTCGGGA TAGTGAGGAA AAGTACCGAA ATATCGTTGA GACAGCAAAT GAAATTATAC TCATAACTGA CAAAGAATCC ATAATCACTT ACGTTAACAA GAAAATGGTA GACATGCTCG GGTATACTTT GGAAGAATTT ATAGGTAAAC CAATATGGAG CTTCATCAGT GAAGAATGTA AATCTGTTGT CAAAATGAAC CTAGAAAAGA GGATGCGGGG AGTAAGTGAG AGTTATGAAT TAAAATTAAT ACGTAAAGAT GGCTCATCCC TTTGGACATT TCTAAATGCT AAACCTCTTT TTGATAAGGA AGGTAAGTAT ATAGGTGCTA TGAGCATGCT AACCGATATT ACCAAGCGAA AAGAAGCTGA AGAAGCTCTT AATATTATCG AAGCTGCCCG TAAAAAAGAG ATCCATCACA GAATTAAGAA CAACCTTCAG GTAATTTCTT CCCTTCTGGA CCTCCAGGCT GAACAGTTCA GAAACCGGGA GAACATTAAG GATTCGGAAG TTCTGGAAGC CTTCAGGGAA AGCCAGGATA GAGTGGTATC CATGGCTCTT ATCCATGAAG AATTATACAA AGGTGGAGGG CTTGAGACAC TAAACTTTTC GCCGTATATT AGGGAGCTTG TTGAGAACCT TTTCCATACA TACAGTCTTG GAGATATTGA CATCAGCTTA AGCATGGATC TTGAAGAGAA TGTTTTCTTT GATATGGATA CTGCTGTCCC GTTAGGAATG ATTGTTAATG AGCTTGTTTC CAATTCCTTC AAACATGCAT TTATAGGAAG AGACAAAGGG GAAATTCGAA TTGAACTTTA CAGGGAAGAA TCCACAGAAT TTGAAAGTGA AAACTGTAAG AGCACCAACT TCATTCTAAC CGTTTCAGAC AACGGTGTAG GCATTCCTGA CAATCTTAAT ATTGAAGATC TCGGTAGTCT TGGCATGCAA CTGGTAGCTT CCCTTATCGA TCAAATGAAT GGTGAGCTTG AACTTAAAAG GAACAATGGC ACAGAATTTA CTATGAAATT TACAGTGACA GAAAAAGATA ATCTGGCTCA AGTAGGCTTA AGCTCACAAG AAAGCAGATA A
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Protein sequence | MPEKNMKNGS IDQKSQGGEE LYRMIFDHSM DGIILTDPRD DGKILLANPA ACRMLGWTEE ELVGKECDEI LDLQEPKLSV LLDERPHSGS ARTQLTYRRK DGTTFLGEVS TGFFTNSNGE PRTVTIIRYI TERKKAVEAL LESESRYKAI FDNSLDGIFV TIPDGTILAA NPAACQMFGM TEEELILAGR NGTVDTSDPR LKSVLDERAR NGRFKGELNH KRKDGTIFPS EISSTLFKDK NGLTKVVMVI RDISERKKAE KKLRESEERL RLLGDNLPDS AVYQYAHELD GSVHFLYFSA GIEKLNGVKV SDVLRDPGTL HRQIPPDYFA RLVEAEARSA RELSDFNMET PMRLPDGQVK WMRLHSRPRR LPDGRTVWDG VQTDITELKR VEEMLRETEL SWKVAEAVES ERQRLFDVLE TLPVMICLLT LDHHIAFANR SFREKFGESE GRHCYERCFG SNQPCELCES YKVLETGQSH QWEVTTPEGS VIDIYSFPFT DVDGSPMILK MDIDVTERKQ AEEKLRDSEE KYRNIVETAN EIILITDKES IITYVNKKMV DMLGYTLEEF IGKPIWSFIS EECKSVVKMN LEKRMRGVSE SYELKLIRKD GSSLWTFLNA KPLFDKEGKY IGAMSMLTDI TKRKEAEEAL NIIEAARKKE IHHRIKNNLQ VISSLLDLQA EQFRNRENIK DSEVLEAFRE SQDRVVSMAL IHEELYKGGG LETLNFSPYI RELVENLFHT YSLGDIDISL SMDLEENVFF DMDTAVPLGM IVNELVSNSF KHAFIGRDKG EIRIELYREE STEFESENCK STNFILTVSD NGVGIPDNLN IEDLGSLGMQ LVASLIDQMN GELELKRNNG TEFTMKFTVT EKDNLAQVGL SSQESR
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