Gene Mbar_A2670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2670 
Symbol 
ID3624780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3383206 
End bp3385113 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content39% 
IMG OID637701526 
Producthypothetical protein 
Protein accessionYP_306156 
Protein GI73670141 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.734137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.611525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATC GATTTATTGC ATTATTGTTA TCAATTTTTA TATTTATAAC AGGATCTGGA 
ATAAGTGCTG CAGCTGACAT AGTAGTGCAC AACGGTGAAT CAATACAGTC AGCTGTGGAC
AATGCAACGC ACGGAGATAC TATAATTGTA GAACCCGGTA CTTATTATGA GAACGTTACT
CTCCGTACAT ACGATCTGGT CATTATGTCC CAATCAGGCA ATCCTGAAGA CACGATAATT
CAAGGGGATG GTTTTTACCT CACAGGTGAT GCACAGGAGA TAACTATTAA AGGTTTTACT
CTAAAAGGTA CTGACACTTC TTATGGAATA AATCTCGGTC AGTTCTCTAA CTGCATGATT
GAAAATAATA AAATTCTGAA TTATGGTACA GGTATTGACA CAAATCTGTA CTCTACTTTT
ACAATAAATG ACAATGAAAT TTCAAATTGT AAATCAGGAG TTTTTGTTGG GGAATGTTAT
TTCAGTGCTA TTGTCAAAAA CAACAGGATT TCTAACTGTG AAACAGGAGT CGTTGTGGGA
GATTCAGGAA ATTCCCAAAT TGAGAATAAC ACAATTACAG AAAATGATCA GGGTATATCC
CTGATGTACG AAGGCCGCGC TGATATTGCT GGTAATACTA TAAGTTTTAA CAAGAAATGT
GGGCTTTACG ATAAAGCAGA TGCTAGTAGC AAGATCTATA ACAATTATTT CAATAACACA
GTAAATGTAA TTTTTGATGA CTATTATGGT TACCCTAACG TCTGGAACAT TACCAGAACA
ACAGGAAAAA ATATTATAGG CGGCCCTTAT ATTGCAGGAA ACTATTGGGC TAAACCTAAT
GGGACAGGCT TTTCTCAAAT ACATTACGAT GTAGACGGAG ACGGTATAGC AGAGGGGATA
GCAAACCTTA GCGAAAGTGA GATCGACTAT GCAGCTCTTG CAACGTTGAA TTCTTCAACG
CCTGAGCAAC CTCCGGCATC AACTAATTCA ACAGTCACTC CTTCCGATAA CGTAACAGAG
ACTCCTTCAG AGGAAATTGT AGATAATAAT AGCAGCAATT CAGATAATAG TTCAGATAAT
AGTTCAGATA ATAGTTCAGA TAATAGTTCA GATAACAGTC CAGATAATAT TTCAGATAAC
AGCTCAGATA ATAGTTCAGA TGACAGTTCT GATAGCAATT CAGATGGCAG TTCTGGTGGA
AGCAGCCACA GAAGCGGAAG TAGCGGTGGC GGTGGTGGTT CTCCTGAACC TCAAACCAAC
GTTCAAGTCA AGGAACTTTC ACAGGCACAG GTTTTAAACG GAAAGCCTGT AATGTTTGAT
TTTCCAAATA ACGTAACCTG TGTTGTGTAT GTCAGCTTTG ATGCAAAGAA GACTGCAGGT
AAGATTACAG CCATTGCCGA ACAGCTTAAA GGAAAATCGA CTCTGGTTTC AGAACTGAAC
TCGGGTGAGG TCTATAAGTA CTTCAACCTC TGGGTTGGAA ACTCAGGATT TGCTACCTCA
AAGAATATTG AAAACCCTGA AGTATGTTTC AAGGTTGAAA AGTCCTGGCT GCAGGATAAG
AAGATCGACC AGAATTCAAT CACACTCAAT AGCTACAGTG ACAAAAAATG GTCACAACTA
CCAACAACCC TGTTAAAAGA AGACAACCAA TACCTGTATT TCACGGCACA CCCCTCAGAA
TTCTCATTCT TTGCAATAAC CGGAGCAACA CCAGAGGGAG CCGGAAATGA AACACAGGCT
GAACCTAATG TTGAAAACCT CAGTAATAAT ACTGGAAACA ATACTGGAAA CGCAACAACA
GGTGTTGAGC AACCTTCTGA GCAAGAAGAA AATAAAGGTA TTCCGGGCTT TGAAATGATT
TACGGAGTAA TAGGGCTTAC TGGAGTGTAC CTGCGTAGAA GAAGGTGA
 
Protein sequence
MKNRFIALLL SIFIFITGSG ISAAADIVVH NGESIQSAVD NATHGDTIIV EPGTYYENVT 
LRTYDLVIMS QSGNPEDTII QGDGFYLTGD AQEITIKGFT LKGTDTSYGI NLGQFSNCMI
ENNKILNYGT GIDTNLYSTF TINDNEISNC KSGVFVGECY FSAIVKNNRI SNCETGVVVG
DSGNSQIENN TITENDQGIS LMYEGRADIA GNTISFNKKC GLYDKADASS KIYNNYFNNT
VNVIFDDYYG YPNVWNITRT TGKNIIGGPY IAGNYWAKPN GTGFSQIHYD VDGDGIAEGI
ANLSESEIDY AALATLNSST PEQPPASTNS TVTPSDNVTE TPSEEIVDNN SSNSDNSSDN
SSDNSSDNSS DNSPDNISDN SSDNSSDDSS DSNSDGSSGG SSHRSGSSGG GGGSPEPQTN
VQVKELSQAQ VLNGKPVMFD FPNNVTCVVY VSFDAKKTAG KITAIAEQLK GKSTLVSELN
SGEVYKYFNL WVGNSGFATS KNIENPEVCF KVEKSWLQDK KIDQNSITLN SYSDKKWSQL
PTTLLKEDNQ YLYFTAHPSE FSFFAITGAT PEGAGNETQA EPNVENLSNN TGNNTGNATT
GVEQPSEQEE NKGIPGFEMI YGVIGLTGVY LRRRR