Gene Mbar_A2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2280 
Symbol 
ID3625132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2889719 
End bp2890036 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content43% 
IMG OID637701153 
Productnitrogen regulatory protein P-II 
Protein accessionYP_305785 
Protein GI73669770 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000332901 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.155983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGG TCCGTGCCAT ATTACGTCCT GAATGGACTG AAGAAGTAAC CGACGGACTC 
GCAGAAGCCG GTTATTACTC CCTTACAAAA ATAAACGTCT TCGGAAGAGG GAAACAAAAA
GGGATCACTG TTGGGGATGT GCACTACGAT GAACTCGCAA AAACAATGAT CATGATGGCT
GTAGAAGATG AGGCTGTTGA CGAAGTGATA AAAATAATTT CCGGAAAAGC ATACACCGGC
AACATGGGGG ACGGAAAAAT CTTTGTAAAT ACGGTTGAAG CTGCATACAC AATTAGCTCA
GGTGAAAAGG GGTTATGA
 
Protein sequence
MKMVRAILRP EWTEEVTDGL AEAGYYSLTK INVFGRGKQK GITVGDVHYD ELAKTMIMMA 
VEDEAVDEVI KIISGKAYTG NMGDGKIFVN TVEAAYTISS GEKGL