Gene Mbar_A1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1808 
Symbolpgk 
ID3625266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2259572 
End bp2260810 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content44% 
IMG OID637700690 
Productphosphoglycerate kinase 
Protein accessionYP_305329 
Protein GI73669314 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTA GAGACTTTCT TACAATCGAT GATTTTGACA CGCACGGAAA GACAATTCTT 
GTAAGGGTTG ACCTGAACTC CCCTATGGAT CCACAGGGTA ATATTCTGGA TGATATGCGG
ATCCGAAGCC ATATTGCCAC CTTGAAGGAT CTTGAGGACG CAAAAGTTGT TTTGCTTGCA
CACCAGAGCA GGCCCGGAAA AAAAGACTTT ACTACAATGA AGCCTCATGC CAACCTGATG
TCCAAATACC TGGGAAAGCA GGTTCTTTAT GTAGATGATA TTTTTGGAAC TTATGCAAAG
ACCAGGATTG CTTCTATGGA AAATGGAGAT GTCATCCTGC TCGAAAATGT AAGGTTCTAT
TCTGAAGAAA GCCTCGAAAG AACTCCAGCA GAACAGGCAA AAACTTATCC GGTTAAAAAA
CTGGCACCTT TTGTAGATAT CTTCCTTAAT GATGCCTTTG CCGTATCTCA CAGGTCTCAA
CTTTCCGTAG TAGGATTTAC AGAGGTTCTC CCTACCGGAG CCGGAAGGGT CATGGAAAAG
GAACTCACGT CTTTGGATCG GGGGATCAAA GGAGGGGAAC GGCCAACGAT TTTCGTTCTC
GGAGGGGCAA AAGTCGATGA TTCGCTCCAT GTGGCGGAAA ATGTGCTTTC AAATGGAGGA
GCTGACCGGG TACTCCTGAC CGGAGTAGTA GCAAATGTGG CACTTGCGGC ATCCGGTATA
GATATCGGAA AAGTAAATCT GGACTTCATC AAATCCCAGG GCTACGAAGA CCAGATCGAA
AAAGCAAAAA GTATACTTAC GAAATTCAAA GATAAAGTTG GTCTTCCAAG GGATGTGGCT
TTAAACGACA ATAAGAAGCG GGTCGAATTG CCTGTTTCAG AACTTAATTC TAATTCTCTT
CCTATAAACG ATATTGGGCT TGAAACCATT GTGGACTTTA CCAGTGAAAT CGCAAGTGCA
AAAACTGTTA TCTTAAACGG CCCTGCGGGG ATTTCCGAAG TTGCTGAGTT TGCCCTTGGA
ACGCACGAGA TTATAAAAGC TGCTATTAAA TCCGAGTTTT CAATCATTGG CGGTGGGCAT
ATTTCGGCAG AAGTTGAGCA TCTCGGGCTT GCACACCGTT TCTCTCACAT CAGTACAGGT
GGCGGGGCAC TAATTGATTA TCTCTCAGGA GTAAAGCTGC CTGGTGTAGA GGCCCTGAAA
TCTGCAGCTA AGAGATATGA AGAAGCTAAG AAAATCTAA
 
Protein sequence
MTSRDFLTID DFDTHGKTIL VRVDLNSPMD PQGNILDDMR IRSHIATLKD LEDAKVVLLA 
HQSRPGKKDF TTMKPHANLM SKYLGKQVLY VDDIFGTYAK TRIASMENGD VILLENVRFY
SEESLERTPA EQAKTYPVKK LAPFVDIFLN DAFAVSHRSQ LSVVGFTEVL PTGAGRVMEK
ELTSLDRGIK GGERPTIFVL GGAKVDDSLH VAENVLSNGG ADRVLLTGVV ANVALAASGI
DIGKVNLDFI KSQGYEDQIE KAKSILTKFK DKVGLPRDVA LNDNKKRVEL PVSELNSNSL
PINDIGLETI VDFTSEIASA KTVILNGPAG ISEVAEFALG THEIIKAAIK SEFSIIGGGH
ISAEVEHLGL AHRFSHISTG GGALIDYLSG VKLPGVEALK SAAKRYEEAK KI