| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1688 |
|---|
| Symbol | |
|---|
| ID | 3625486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2085504 |
|---|
| End bp | 2086529 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637700567 |
|---|
| Product | methylcobalamin:coenzyme M methyltransferase |
|---|
| Protein accession | YP_305210 |
|---|
| Protein GI | 73669195 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.967324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.14364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAT TTACCCTGAG AGAGAGGTTT GAAAAGGCAC TCAAAGGAGA GGCTGTAGAC
ATTATTCCTG TCTGTTCCGT AACTCAGACA GGCACTGTAG AACTAATGGA AACGACTGGA
GCATACTGGC CCCAGGCAAA TTTCAATGCC GATCAGATGG CTACGCTTGC ACTTGCCGGG
TATGAAACTG CAGGATTTGA GAATGTACGC TGTCCTTTTG ACATCACCGT ACTTGCAGAG
ACCCTTGGGT GCACAGTAGA CGAAGGAAGT ATAGATATGC AGCCTTATAT TACGGATTTC
CCCTGCAAAA ACGAGAAAGA TGTGAAGAAC ATAACGGTTC CAGATTCGCT TCTTGAGGGC
AGGCGGACCT CGGTAGTCCT GGAAGCGGTT GAAATTCTTA ACGAAAAAGT AGGAGAGACG
GTGCCTGTTG TTGCAGGGGT TGTTGGCCCT GCTGGACTTG CTTTCATGCT TGCCGGAATA
AAAAATTATA TTACATGGTT TGTGAAGGAT ACTGAAGTTG TTGAGGAACT AATGGGTGTT
CTTACCGATG CCTGCATAGA ATATGCCAAT GGTCTGCTTG AAAGAGGCGC ACATGCCATA
ACCCTTATAG ACTCCGAAGC AGGACCTGAT ATTATTTCCC CTAAGATGTT CGAAGAATCG
GTCTTTCCCC TTTACAGGAA ATTTTGCAGG AAAGTAAAAG GCTTGAAAGT CCTTCACATG
TGTGGCGACG CCACAGCCGT TCTTAATTCT CTCGGAGATG CAGGTTTTGA TGGGATAAGT
ATTGAAGAAA AAGTAAGTGT AAGTTTCGCA AAAGCGGCTA TAGGCGATCG GGTACGGCTT
ATAGGAAATA TTTCTCCGTC CGATACCCTG CTTGCAAAAG GGCCTGAAGC AGTTCTCCTT
GAGGCTACTG CCTGCCTTGA AGATGGAATT GATATCCTTG CTCCAGGTTG CGGGCTGGCC
CCACATACTC CACTTGAGAA TATAAAGGCG CTTGTCAGGG CAAGAGACGA TTACTTCTTA
CAGTGA
|
|---|
| Protein sequence | MSQFTLRERF EKALKGEAVD IIPVCSVTQT GTVELMETTG AYWPQANFNA DQMATLALAG
YETAGFENVR CPFDITVLAE TLGCTVDEGS IDMQPYITDF PCKNEKDVKN ITVPDSLLEG
RRTSVVLEAV EILNEKVGET VPVVAGVVGP AGLAFMLAGI KNYITWFVKD TEVVEELMGV
LTDACIEYAN GLLERGAHAI TLIDSEAGPD IISPKMFEES VFPLYRKFCR KVKGLKVLHM
CGDATAVLNS LGDAGFDGIS IEEKVSVSFA KAAIGDRVRL IGNISPSDTL LAKGPEAVLL
EATACLEDGI DILAPGCGLA PHTPLENIKA LVRARDDYFL Q
|
|---|
| |