Gene Mbar_A1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1350 
Symbol 
ID3627423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1664962 
End bp1665528 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content43% 
IMG OID637700240 
Producthypothetical protein 
Protein accessionYP_304891 
Protein GI73668876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0718153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.422526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA CGTTTAAAAA GATATACCAG TTAAAGCTTT CAATAAAAGG TATTAGTCCT 
AAGATCTGGC GGCGAATCCA GGTGCCGGAA AATTATACTT TTCTGGACCT TCATAAGGCA
ATCCAGACTG CAATGAATTG GGAAGATTAC CATTTGCATG AATTCGAAAT GCAAAACCCA
AAAACCGGTG AACTTGAAAA AATAGGGGAA ACAGACGACG GTTGTGAAAC TTTCTGTGAA
CCCCTTGTGC CGGAAAATAA GGCTAAGCTT TCCAAATACT TCACTCCGGA AAATAAGGTT
GCTCTGTACA CCTACGATTT CGAGGACAAC TGGGAGATAA AAGTCCGGCT TGAGGAAATC
CTTCCGAAAA AAAAAGGAGC GAAATATCCA GTCTGCACTG CAGGAAAAAG AGCAGCTGCC
CCTGAAGATA TAGGAGGAAC AGGGGGCTAT GAAGAGATGC TCGATATCCT GGAAGACCCT
AAACATGAGG AATACGAACA TACAGTGGCG TGGCTGGGGA CAAATTTTGA CCCAGAGTAT
TTTAAACCAA GAGACGTTGC TTTCTGA
 
Protein sequence
MKDTFKKIYQ LKLSIKGISP KIWRRIQVPE NYTFLDLHKA IQTAMNWEDY HLHEFEMQNP 
KTGELEKIGE TDDGCETFCE PLVPENKAKL SKYFTPENKV ALYTYDFEDN WEIKVRLEEI
LPKKKGAKYP VCTAGKRAAA PEDIGGTGGY EEMLDILEDP KHEEYEHTVA WLGTNFDPEY
FKPRDVAF