| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0330 |
|---|
| Symbol | |
|---|
| ID | 3626653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 387749 |
|---|
| End bp | 389062 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637699222 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_303894 |
|---|
| Protein GI | 73667879 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | [TIGR02640] gas vesicle protein GvpN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.608164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATA AAGCAACGCA CCAGAGAGTA GTAAGGGGTA AACCTATTCA CAAAACCTTG
GAGGAGACAA AACAGGAATC AAACAATGAG GATCTGAAAC CTATAAAGGA ACCACTTTCA
TCCAGTGTAG ATTTGAAAAA CTGCTCTGAA GAAAAAAAGT ATCTTGTTCC TGAAATGGAA
TATTTTATAA ATAATACTGA AATCCAGAAA TTAAGTGAAA GAATAAAATT GTGGATAAAA
GTTGGATATC CCGTGCATTT AATTGGCCCT ACAGGCTGTG GAAAAACAAG CCTTGCCGTA
CATATTGCAA AAGAACTCGG ACGCCCTGTT ATATGGATTA ACGGGGATGA GTCACTTACA
ACAAAGGATC TCATAGGTGG ATATGCTCAA ATCAAGCAGG AATCGATAAG AGATAATTAT
ATTCATAACG TTTTTAAAAG CTCGGATATT ATAAAGCCCG AATGGATTGA TAATCCTCTG
GCTATTGCAT GTAAGTACGG ATATACCCTC ATATATAATG AGTTTTCCAG AGCAAAACCA
ATTGCAAACA ATGTTTTACT TTCGGTTTTT GAGGAAGGAA TCCTTGAATT ACCAGCCAGG
TTTGGTGGGG AAAAATACAT AAAAGTGCAT CCAGATTTCA GGGCAATTCT GACAAGTAAT
TCAATTGAAT ATGCAGGAGT TCATGTTCCT CAGGATGCTT TACTGGATCG AATGGTGGGT
ATATACATGG ACTATTATAG CTTTGAAACC GAGGCTCAGA TAGTAAAAGA GCATACAGGT
CTGTCTGAGA AAGAGACTGA AAAAATCGTA TCTGTTATCA GGAAGATAAG GGATCAGACT
GATGATATCC AGAAACCTGG AATCAGGTCT GGTATTATGG TTGGAAAAGC TATGAAAAAA
CTGAACGGCA ATACAAAAGA TTATTTTGAT CAATTGTTTG TCGATGTTAT TGCAACAAAA
ACAAGTTCCA ATGCGGAACT TCTTAAGAAA GAGAAGCTTG TAAATGAAGT TATTTTAGAA
CTTAATTCTG AAAAAGAGAA TTCCAAAGCT GAAATACATA AGACCGAGAA ACCCGTAGAT
AAAACGACCC CGGAGAGTAA TAAGAAGCGA GATCCAGCAC CGGTAGTCAA GACAGAAAAA
ACTGTAAGTA AAAAAGCTCC TGCGATTAAT AAGAAGCAAG ATCCAACACC AGTAGTCAAG
GCAGAAAAAA CTGTAAGCAA AGCAGCCCCA GAGAGTAATA ATAAGAAGCA AGATTCGGCA
TCGGTGATTA AGACAGAGAA GCTCGTAGAT AAAGCAGTTT CAGAACTTGC ATAA
|
|---|
| Protein sequence | MKYKATHQRV VRGKPIHKTL EETKQESNNE DLKPIKEPLS SSVDLKNCSE EKKYLVPEME
YFINNTEIQK LSERIKLWIK VGYPVHLIGP TGCGKTSLAV HIAKELGRPV IWINGDESLT
TKDLIGGYAQ IKQESIRDNY IHNVFKSSDI IKPEWIDNPL AIACKYGYTL IYNEFSRAKP
IANNVLLSVF EEGILELPAR FGGEKYIKVH PDFRAILTSN SIEYAGVHVP QDALLDRMVG
IYMDYYSFET EAQIVKEHTG LSEKETEKIV SVIRKIRDQT DDIQKPGIRS GIMVGKAMKK
LNGNTKDYFD QLFVDVIATK TSSNAELLKK EKLVNEVILE LNSEKENSKA EIHKTEKPVD
KTTPESNKKR DPAPVVKTEK TVSKKAPAIN KKQDPTPVVK AEKTVSKAAP ESNNKKQDSA
SVIKTEKLVD KAVSELA
|
|---|
| |