| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1245 |
|---|
| Symbol | |
|---|
| ID | 3609214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 1330052 |
|---|
| End bp | 1331080 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637690630 |
|---|
| Product | porin |
|---|
| Protein accession | YP_295460 |
|---|
| Protein GI | 73540940 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.240847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAT TCAGTTTTAT CGGGCGAGCG TGCCTGGGCG GCGCGCTGCT GGCAGCGTCG
GCCGGCGCGG ACGCTGCCAT GACGCTCTAC GGCCGTATCG ATACCGATAT CGAATATCAG
CGCGGTCCGC GCGGCAATGC GGCGCAAATG GTGGACAACG CATCGCGCTG GGGCATGCGC
GGCAACGAAG ACCTTGGCGG TTCGCTGCGT GCGGATTTCG GCCTGGAGCA GGGCTTCCAG
GCTGACAATG GCACTGCCAC CAATCCGCAG TTCCGCAATG CCTTTGTTGG CCTGAGCGGC
GTGTTTGGCG CGTTTGCGCT GGGGCGGCTC GATTCCGCGA CGTCGGTTGG TTCGCCCATT
TATTCGCAGA TTACGCAGAA CGTCGATTTC GTGATCCACG ATGCCGGCGC CACCGCCATC
GGCACCAAGG TGCTTAATGC GCGCAACCGC GTATCGAACG CGCTCGGCTA CGCGACGCCA
GATTTCGGGG GGTTCTCGCT GCGTGCCCGT ATCAACTTGG CCGGGCCGGA TCCCGCTACG
CCCAATGCCA GTTCCCCGGT GAAGGAAGAG GACGATTTTC GCCAGTACGA CACCGGGCTG
AACTATGCCT CGGGCAACTT CTCCGCGGGC CTCGGTTATT CGCGCGATGC CAAGACCGGC
GGGCTCGTCG CCAATGATTT TCGCGACAAG ATGCAGGCAA CGGCCGCCTA TGACTTCAAG
TTCGTCAACG TGTACGGCGT GTACGGGCGC GACCGCTATG TCGGCACGGC CAGTTCGCGC
ACCGACGTGC GCTACTGGCT CGCCGGCTTC ACGGTTCCCT ACGGCGCGCA CAGCCTGACC
GTGAACTACA TGGAGCGCGA CGTGCAGAAC AGCACGAGCG GCAGGCTGCG CAAGGCGCAG
GCCGGCTATG GCTATCGCCT CAGCAAGCGC ACCATGCCTT ACGTCTTCTT CGACTACGAA
GACGGCAACA GCCGCAAGCC CGGCGATACC GTAGTTACCT ACGGCATCGG CATCCAGCAC
AAGTTCTGA
|
|---|
| Protein sequence | MKSFSFIGRA CLGGALLAAS AGADAAMTLY GRIDTDIEYQ RGPRGNAAQM VDNASRWGMR
GNEDLGGSLR ADFGLEQGFQ ADNGTATNPQ FRNAFVGLSG VFGAFALGRL DSATSVGSPI
YSQITQNVDF VIHDAGATAI GTKVLNARNR VSNALGYATP DFGGFSLRAR INLAGPDPAT
PNASSPVKEE DDFRQYDTGL NYASGNFSAG LGYSRDAKTG GLVANDFRDK MQATAAYDFK
FVNVYGVYGR DRYVGTASSR TDVRYWLAGF TVPYGAHSLT VNYMERDVQN STSGRLRKAQ
AGYGYRLSKR TMPYVFFDYE DGNSRKPGDT VVTYGIGIQH KF
|
|---|
| |