| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1646 |
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| Symbol | |
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| ID | 3607047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | - |
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| Start bp | 314916 |
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| End bp | 316409 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637688527 |
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| Product | retinal pigment epithelial membrane protein |
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| Protein accession | YP_292837 |
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| Protein GI | 72383482 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTA GTTATTTAAA AAGAGAAACA TCACCAAAGC AAACAATCTT CAACAAAGAA
GATTGGTCCA GTGCATATTG CAATGTTGAA AAAGAATTAG ATAACGTTCA ACTCAAGCTT
GTAAAAGGAT CTATTCCTGA ACAAATTTCT GGTACCTTTT ATCGAAACGG CCCAGGTAGA
TTAGAAAGAG GGGGAAGATG GGTCCATCAT CCATTTGATG GAGATGGCAT GATTGCTGCC
TTCAAATTTG ACAATGGAAA AATAAACCTG ACGAATCGTT TTGTTCGCAC AAAGGAATGG
ACAGAAGAAG AAAAATCCCA AAAATTTCTA TATAGAGGTG TATTTGGAAC TCAAAAAGAA
GGAGGAGTGT TAGCTAATGC TTTTGATGTA AGGCTAAAAA ATATTGCCAA TACACACGTA
ATAAAACTTG GAGATGATCT ACTAGCTTTA TGGGAAGCGT CTAGTCCATA TTCACTTAAT
CCAAATACCC TTGAGACCAA AGGTTTATCA AATTTAAAAG GAGTTTTAAA AAAAGGTGAA
GCATTTAGTG CTCATCCACG ATTTGACCCT GGCCATCATC AAAGTCAAAG AATGGTCACT
TTTGGGGTAT CTACAGGTCC TAAAAGCACA ATAAGATTGA TGGAATTTTC CACAGAGGGA
GAAAATATTG GTTCTCTTTT AAGTGATAGA AAAGATTCTT TTAATGGATT TGCCTTCTTG
CATGATTTTG CCATAACTCC AAACTGGGCA ATATTTCTGC AAAATGCTAT TAGTTTTAAT
CCTCTCCCTT TTCTTCTTGG ACAAAAAGGA GCCGCACAAT GTTTAGCCTC TAAAAGTGAT
GGAACTCCAA AATTTTTATT AATTCCAAGG GACTCTGGCA AGTTTGCTGG TCAACCTCCA
AAATCAGTTA ATGCTCCAAA GGGTTTTGTT TTTCATCATC TAAATGCATG GGAAGATAAT
GAAAAAATCA ATATTGAAAG TATTTTTTAT GATGATTTTC CGAGCATTGG ACCCGAAGAT
AATTTTAGAG AAATTGATTT TGATCTTTTA CCAGAAGGAA TTTTGAAAAG AAGTGAAATC
AATCCCATAG AAAATACATT TACCTGCTCA ACAATAAGCA ATCAATGTTG TGAATTTGCA
ATGGTTAATC CTCATTTTGA AGGATTAAAG GCCCGCTTTA GTTGGATGGC AACTGCAGAA
GAAAAAGAGG GGAATGGGCC ACTTCAAGCC ATAAAAAAAA TCGATTTATC TAATAATAAA
GAGATAAGTT GGAGTGCGGC TCCAAGAGGT TTTGTAAGTG AACCTATATT TATTCCATCT
CAAGAATCAA AGTCTGAAGA AGACAATGGA TGGGTTGTTG CATTGGTTTG GAATAGTATT
AGATCGGGAA CTGATTTAAT AATTCTTGAT TCTAAAGATC TGACTGAAAA AGCTATTCTT
GAAGTTCCAA TATCAATCCC ACATGGATTA CACGGAAGCT GGGTTGAAAA TTAA
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| Protein sequence | MAVSYLKRET SPKQTIFNKE DWSSAYCNVE KELDNVQLKL VKGSIPEQIS GTFYRNGPGR
LERGGRWVHH PFDGDGMIAA FKFDNGKINL TNRFVRTKEW TEEEKSQKFL YRGVFGTQKE
GGVLANAFDV RLKNIANTHV IKLGDDLLAL WEASSPYSLN PNTLETKGLS NLKGVLKKGE
AFSAHPRFDP GHHQSQRMVT FGVSTGPKST IRLMEFSTEG ENIGSLLSDR KDSFNGFAFL
HDFAITPNWA IFLQNAISFN PLPFLLGQKG AAQCLASKSD GTPKFLLIPR DSGKFAGQPP
KSVNAPKGFV FHHLNAWEDN EKINIESIFY DDFPSIGPED NFREIDFDLL PEGILKRSEI
NPIENTFTCS TISNQCCEFA MVNPHFEGLK ARFSWMATAE EKEGNGPLQA IKKIDLSNNK
EISWSAAPRG FVSEPIFIPS QESKSEEDNG WVVALVWNSI RSGTDLIILD SKDLTEKAIL
EVPISIPHGL HGSWVEN
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