| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1328 |
|---|
| Symbol | |
|---|
| ID | 3606723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 189 |
|---|
| End bp | 1349 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637688204 |
|---|
| Product | DNA polymerase III subunit beta |
|---|
| Protein accession | YP_292520 |
|---|
| Protein GI | 72383165 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA GTTGTTCTCA GTCTGAATTA AATAATGCTC TTCAATTGGT TAGTAGAGCT
GTTTCTAATC GACCGACTCA CCCTGTATTG GCTAATGTTT TGCTCGCTGC TGATGAGGTC
ACTGGAAAAC TTCGTCTGAC TGGTTTTGAT TTAAGTTTAG GAATACAAAC TTCAATATCT
GCTTCTATAG ACAGCAGTGG TGCTATAACT TTGCCTGCTA AGTTGTTTGG TGAAATTGTT
TCGAAATTAT CTAACGACTC ACCTTTAGTT CTGACGTCAG ATGAAACTAG TCAACAAGTC
GAGTTAACTA GTAAAAGTGG AACGTATCAA GTAAGAGGTA TGCTGTCTGA TGATTTTCCT
GAGTTACCTT TAGTAGAAAA TGGTACTTCA TTTAAATTGA ATCCATTATT ATTATCTAAT
GCAATTAAAT CAACTTTATT TGCAAGTAGT ACAGATGATG CTAAGCAATT ACTTACTGGT
GTTAATCTTA CCTTTGACGG ATATGGTATT GAATCTGCAG CTACCGATGG ACATAGATTA
GCTGTCCTTA ATTTAAATAA TATTTTATCC GATTCAAAAG AGATAGATAG TTCTATTAAA
TTCGAAAAAT TTTCTATTAC ATTACCTTCC AAATCTTTAA GAGAAGTAGA AAAATTTTTA
AGCACTTGTG ATATTAGTCA TCCAATTAAT TTTTTTATTG ATAAAGGACA AGTAGTTTTT
ATATCTGTTG AAGATATTAT AACTATAAGA GCTTTAGAAG GTTCTTATCC AAATTATTCG
CAATTATTAC CTGATACTTT TGAAAACGAA TTAGAATTTG ATCGGAAAGA ATTTATATCT
TCATTAGAAA GAATTGCTGT TTTAGCAGAT CAGCATAATA ATGTTATAAA GGTAACGACT
GACGGCTCTG CTAATTTAAT CAAAATAAGT ACAGATGCCC AAGATATTGG AACAGGTTAT
GAGTCACTAC CTGTTTCTTA TAAAGGGGAT TCTTTTCAAA TAGCATTTAA TGTTAGATAT
TTATTAGATG GGCTCAAAGT CATAGATTCA AACCTGATTA AATTAAGTTG TAATTCTCCT
ACTACACCTG CAATTTTCTC ACCTATTAAT AGTGACGTTA ATTTCACTTA TCTAGTAATG
CCTATACAAA TACGAAATTA A
|
|---|
| Protein sequence | MKLSCSQSEL NNALQLVSRA VSNRPTHPVL ANVLLAADEV TGKLRLTGFD LSLGIQTSIS
ASIDSSGAIT LPAKLFGEIV SKLSNDSPLV LTSDETSQQV ELTSKSGTYQ VRGMLSDDFP
ELPLVENGTS FKLNPLLLSN AIKSTLFASS TDDAKQLLTG VNLTFDGYGI ESAATDGHRL
AVLNLNNILS DSKEIDSSIK FEKFSITLPS KSLREVEKFL STCDISHPIN FFIDKGQVVF
ISVEDIITIR ALEGSYPNYS QLLPDTFENE LEFDRKEFIS SLERIAVLAD QHNNVIKVTT
DGSANLIKIS TDAQDIGTGY ESLPVSYKGD SFQIAFNVRY LLDGLKVIDS NLIKLSCNSP
TTPAIFSPIN SDVNFTYLVM PIQIRN
|
|---|
| |