Gene PMN2A_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1074 
Symboltuf 
ID3606461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1564245 
End bp1565444 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content42% 
IMG OID637687944 
Productelongation factor Tu 
Protein accessionYP_292267 
Protein GI72382912 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCG AGAAGTTTGA GAGGAACAAA CCTCACGTCA ACATAGGTAC TATTGGCCAC 
GTTGACCATG GCAAAACAAC CCTTACAGCA GCAATTACGA AGGTTTTAGC AAAGAAAGGT
CAAGCCGAAG CGCAAGATTA CGCTGAAATT GATGGAGCTC CAGAAGAGCG TGAACGCGGC
ATAACAATCA ACACTGCTCA CGTTGAATAT GAAACTGAGG GCAGGCATTA CGCTCACGTT
GATTGCCCAG GTCACGCTGA TTATGTAAAA AACATGATCA CAGGTGCTGC TCAGATGGAC
GGTGCGATTC TTGTTGTAGC AGCTACCGAT GGAGCAATGG CACAAACAAA AGAACACATT
CTTTTGGCGA AGCAGGTTGG AGTACCCGCA TTGGTTGTTG CACTAAACAA ATGTGACATG
GTTGATGATG AAGAAATGAT AGAACTTGTA GAAATGGAGA TTCGTGAACT TCTTACAAGT
TATGACTTCC CCGGCGATGA CATCCCTGTC GTTCAAGTTT CGGGATTAAA AGCTATCGAA
GGAGAAGCAG ATTGGGAGAC TAAAATAGAT GACTTGATGA CAGCTGTTGA TGCATCAATT
CCAGAACCAG AACGTGAAAT TGATAAGCCT TTCTTAATGG CTATTGAAGA CGTTTTTTCA
ATTACTGGAC GAGGAACAGT TGCTACTGGA AGAATTGAAA GAGGAAAAGT AACAGTCGGA
GAGGAAGTTG AAATTGTAGG AATTAGAGAT ACAAGACTAA CCACTGTTAC AGGTGTCGAG
ATGTTTAGAA AACTTCTTGA TGAAGGTATG GCTGGTGACA ACGTTGGACT TCTTTTACGT
GGTATTCAGA AGGAAGATAT CGAGAGAGGA ATGGTTCTTG TTAAAAAAGG TTCCATCACA
CCTCATACTA AGTTTGAAGG TGAAGTTTAT GTATTAAAAA AAGAAGAGGG TGGCCGCCAT
ACCCCATTCT TTGCTGGTTA TCGACCACAG TTTTATATTC GTACTACTGA TGTAACAGGT
CAAATTACTG CATTCACATC TGATGACGGC AGCAATGTCG AAATGGTTAT GCCTGGGGAC
AGAATAAAAA TGACAGGAGA ATTGATAGCC CCTGTTGCTA TAGAACAAGG TATGAGATTC
GCTATTCGCG AAGGTGGACG TACAATTGGA GCAGGAGTAG TTTCTAAAAT TATTGAATAA
 
Protein sequence
MAREKFERNK PHVNIGTIGH VDHGKTTLTA AITKVLAKKG QAEAQDYAEI DGAPEERERG 
ITINTAHVEY ETEGRHYAHV DCPGHADYVK NMITGAAQMD GAILVVAATD GAMAQTKEHI
LLAKQVGVPA LVVALNKCDM VDDEEMIELV EMEIRELLTS YDFPGDDIPV VQVSGLKAIE
GEADWETKID DLMTAVDASI PEPEREIDKP FLMAIEDVFS ITGRGTVATG RIERGKVTVG
EEVEIVGIRD TRLTTVTGVE MFRKLLDEGM AGDNVGLLLR GIQKEDIERG MVLVKKGSIT
PHTKFEGEVY VLKKEEGGRH TPFFAGYRPQ FYIRTTDVTG QITAFTSDDG SNVEMVMPGD
RIKMTGELIA PVAIEQGMRF AIREGGRTIG AGVVSKIIE