Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1072 |
Symbol | |
ID | 3606459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1563081 |
End bp | 1563743 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637687942 |
Product | ATP-dependent protease La (LON) domain |
Protein accession | YP_292265 |
Protein GI | 72382910 |
COG category | [R] General function prediction only |
COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.281275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGAAC TTTCAGTTAG GGAGCTACCA CTTTTCCCAT TGCCTGAGGT TGTGCTTTTT CCTCAGGAGT ATTTGCCACT TCATATTTTT GAGACTCGTT ACAGAGTTAT GCTTCAATCT GTGTTGAAAT CGGATAGCCG TTTTGGAGTA GTTAGATGGG ATCCAATTGC AAAAAAAATG GCAGATGTAG GTTGTTGCGC TGAGATTATT AAGCATCAAA CTTCACAAGA TGGTAGAAGT AATATTGTGA CTATTGGACA GCAAAGATTT CGAATTCTTG AAATTATTAG TGAAACTCCA TTTATTAACG CACTAGTTAG TTGGGTCGAT GATGAACAAA TCTCAGATCA AACCAAACTA TTGGAACTAA AGGATTCAGT ATCAATTGCT CTAAAGGATG TAGTTTCACT TACCTCAAAA TTAACTGAAT CTGAGAAAGA ACTTCCTGAT TCTTTGCCTG ACATTCCAAG AGAATTGTCT TTTTGGATAG CTGCTCATCT TGGCGGTCCA GTAGCAAACG AGCAGCAAAA TCTATTAGAA ATAACAAATA CGTTTCAACG TTTGGAAAGA GAATATGAAC TGCTTGATCA CACAAGAAAG CAACTAGCTG CCAGAACTGC TTTAAAAGAT ACTTTCTCAA ACGCCGATCA AGCCAACAAT TAA
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Protein sequence | MSELSVRELP LFPLPEVVLF PQEYLPLHIF ETRYRVMLQS VLKSDSRFGV VRWDPIAKKM ADVGCCAEII KHQTSQDGRS NIVTIGQQRF RILEIISETP FINALVSWVD DEQISDQTKL LELKDSVSIA LKDVVSLTSK LTESEKELPD SLPDIPRELS FWIAAHLGGP VANEQQNLLE ITNTFQRLER EYELLDHTRK QLAARTALKD TFSNADQANN
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