Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0294 |
Symbol | |
ID | 3605666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 833170 |
End bp | 834399 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637687152 |
Product | putative ABC transporter |
Protein accession | YP_291489 |
Protein GI | 72382134 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA AACTCCCGCT TGCTGAAACT TCGGGAATGG CAATAAAGAA TCTTAAGTCA AATAAGTTTA GAAGCTTATT AACAATGCTA GGGATAGTGA TTGGAAATGC TTCTGTCATA ACACTTGTAG GTGTAGGGAG AGGAGCACAA AATCTTGCGG AAAATCAACT AAGCAATCTT GGAGCAAATG TTTTATTTGT TGTTCCTGGG AATAATGACA CAAGAAGAAG AGGAGTGGCT TTTCCCAAGA ATCTCGTTCT TAAAGATGCA AAAGCAATAA AAGAACAAGT TCCTACTGTT AAAAGAGTCG CCCCACAAAT ATCATCTAAT GAAGTCATCC AAACTGGTTC TAAAAGTACT AGTAGTTCTA TTTCAGGCGT TACAAGTGAC TTCTTAATTG TAAGAAGCTT TGAAATTGCA AAAGGACGTT TTATCAATAA TCAAGATACA AAAGGAGCTA AGAACGTAGT GGTAATTGGT CCCGATCTTG AAGAGAAACT TTTTAAAAAT AGAGAAGGTT TGGGAGAGCG GATAAGAATA AAAGATCAGT CTTTTGAAAT TGTGGGAGTA ATGAAGCCTA AAGGTGCTGT GTTTGGAAAT AATCAAGACG AAAACGCTTA CATTCCTTTA TCCACAATGG TCAGCAGAAT TACTGGTAAA GATCCAACCT ATGGAGTAAG TCTAAGTTTC ATAAGTGTTG AAGCAATAAA TGAAAAATCA ACAAAGGCTG CAAAATTTCA GATAACAAAC TTATTAAGAC AACGACATAA AATAATTAGA GATGATGACT TTGCTGTTAG ATCTCAAAAA GATGCTTTGC AAATAGTTTC AACTATTACG GGCGGTTTAA CATTAATGCT TGCTGCAATA GGAGGTATTT CATTATTAGT TGGTGGAATA GGTATTATGA ATATCATGCT GGTATCTGTT AGCGAAAGAA CTGAAGAAAT AGGCCTTAGG AAAGCATTAG GAGCTAGAAG ACTTGACATA TCAACACAAT TCCTAATTGA ATCATTAATT CTTTCTAGTC TAGGCGGTAT TGCAGGAACA GGTTTAGGAC TAACCACTGT AAAAGTTGTA GCCTTATTAA CACCTCTACC TGCAACAATT GGACTTGGTA CTGTCTTCAT AACAGTTATA ATTTCCGGTA CAATAGGTTT GACTTTTGGT GTTCTGCCAG CAAAAAGAGC CGCAAAACTA GATCCAATTA CCGCACTTAG AAGTTTATAA
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Protein sequence | MKRKLPLAET SGMAIKNLKS NKFRSLLTML GIVIGNASVI TLVGVGRGAQ NLAENQLSNL GANVLFVVPG NNDTRRRGVA FPKNLVLKDA KAIKEQVPTV KRVAPQISSN EVIQTGSKST SSSISGVTSD FLIVRSFEIA KGRFINNQDT KGAKNVVVIG PDLEEKLFKN REGLGERIRI KDQSFEIVGV MKPKGAVFGN NQDENAYIPL STMVSRITGK DPTYGVSLSF ISVEAINEKS TKAAKFQITN LLRQRHKIIR DDDFAVRSQK DALQIVSTIT GGLTLMLAAI GGISLLVGGI GIMNIMLVSV SERTEEIGLR KALGARRLDI STQFLIESLI LSSLGGIAGT GLGLTTVKVV ALLTPLPATI GLGTVFITVI ISGTIGLTFG VLPAKRAAKL DPITALRSL
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