Gene PMN2A_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0294 
Symbol 
ID3605666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp833170 
End bp834399 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content36% 
IMG OID637687152 
Productputative ABC transporter 
Protein accessionYP_291489 
Protein GI72382134 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA AACTCCCGCT TGCTGAAACT TCGGGAATGG CAATAAAGAA TCTTAAGTCA 
AATAAGTTTA GAAGCTTATT AACAATGCTA GGGATAGTGA TTGGAAATGC TTCTGTCATA
ACACTTGTAG GTGTAGGGAG AGGAGCACAA AATCTTGCGG AAAATCAACT AAGCAATCTT
GGAGCAAATG TTTTATTTGT TGTTCCTGGG AATAATGACA CAAGAAGAAG AGGAGTGGCT
TTTCCCAAGA ATCTCGTTCT TAAAGATGCA AAAGCAATAA AAGAACAAGT TCCTACTGTT
AAAAGAGTCG CCCCACAAAT ATCATCTAAT GAAGTCATCC AAACTGGTTC TAAAAGTACT
AGTAGTTCTA TTTCAGGCGT TACAAGTGAC TTCTTAATTG TAAGAAGCTT TGAAATTGCA
AAAGGACGTT TTATCAATAA TCAAGATACA AAAGGAGCTA AGAACGTAGT GGTAATTGGT
CCCGATCTTG AAGAGAAACT TTTTAAAAAT AGAGAAGGTT TGGGAGAGCG GATAAGAATA
AAAGATCAGT CTTTTGAAAT TGTGGGAGTA ATGAAGCCTA AAGGTGCTGT GTTTGGAAAT
AATCAAGACG AAAACGCTTA CATTCCTTTA TCCACAATGG TCAGCAGAAT TACTGGTAAA
GATCCAACCT ATGGAGTAAG TCTAAGTTTC ATAAGTGTTG AAGCAATAAA TGAAAAATCA
ACAAAGGCTG CAAAATTTCA GATAACAAAC TTATTAAGAC AACGACATAA AATAATTAGA
GATGATGACT TTGCTGTTAG ATCTCAAAAA GATGCTTTGC AAATAGTTTC AACTATTACG
GGCGGTTTAA CATTAATGCT TGCTGCAATA GGAGGTATTT CATTATTAGT TGGTGGAATA
GGTATTATGA ATATCATGCT GGTATCTGTT AGCGAAAGAA CTGAAGAAAT AGGCCTTAGG
AAAGCATTAG GAGCTAGAAG ACTTGACATA TCAACACAAT TCCTAATTGA ATCATTAATT
CTTTCTAGTC TAGGCGGTAT TGCAGGAACA GGTTTAGGAC TAACCACTGT AAAAGTTGTA
GCCTTATTAA CACCTCTACC TGCAACAATT GGACTTGGTA CTGTCTTCAT AACAGTTATA
ATTTCCGGTA CAATAGGTTT GACTTTTGGT GTTCTGCCAG CAAAAAGAGC CGCAAAACTA
GATCCAATTA CCGCACTTAG AAGTTTATAA
 
Protein sequence
MKRKLPLAET SGMAIKNLKS NKFRSLLTML GIVIGNASVI TLVGVGRGAQ NLAENQLSNL 
GANVLFVVPG NNDTRRRGVA FPKNLVLKDA KAIKEQVPTV KRVAPQISSN EVIQTGSKST
SSSISGVTSD FLIVRSFEIA KGRFINNQDT KGAKNVVVIG PDLEEKLFKN REGLGERIRI
KDQSFEIVGV MKPKGAVFGN NQDENAYIPL STMVSRITGK DPTYGVSLSF ISVEAINEKS
TKAAKFQITN LLRQRHKIIR DDDFAVRSQK DALQIVSTIT GGLTLMLAAI GGISLLVGGI
GIMNIMLVSV SERTEEIGLR KALGARRLDI STQFLIESLI LSSLGGIAGT GLGLTTVKVV
ALLTPLPATI GLGTVFITVI ISGTIGLTFG VLPAKRAAKL DPITALRSL