Gene PMN2A_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0075 
Symbol 
ID3605482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp628810 
End bp629826 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content33% 
IMG OID637686930 
Productsmall-conductance mechanosensitive channel 
Protein accessionYP_291270 
Protein GI72381915 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.221122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATT TTTATAAAAA CATAATCATT TCATTACTTA CTTTTAGCGT TGGTTGCATT 
ATTTCCCTGG TAAGTTCAAA AATCCTAAAA AAGGTTTTAA GGAGAATAAC CTCTGCGACT
CAAAGCAAAA CTGATGACTA CATAGCTATT CTTTTAATTG AGACTATTAA ACCTTTAGGG
TTTATCTTAA GTTTCATAGT TGCATGGAAA GTCTTACTGA TTGGTGGAAT AGTTGATAAG
ACATTGATTG GTATTAGTAA GTTTCTATGC CTTATTTATA TTGTCAGATT TATAAATAGA
GTATTTTTAA AGATAATACA AAGATGGGCA AGTAAAATCA ATGATCAATC CATAAGTGAA
ATGATTCGTT CACTTAGTCC AATGGTTGGG GCATCTGTTT GGAGTCTAGG AGTTATTTTT
TACCTTCAAA ATATGGGTGT CCAAATGGCA GCCATTTGGG CTCTTTTAAG TGCAGGAGGT
ATAGGAGCTG GACTTGCATT AAAGGAACCA GTTCAAGAGT TCTTCGAATA CATAACGATA
CTCCTAGATA AACCATTTCA AAGTGGACAG TTCATTCATA TTGATGGGAT CTGGGCAAAG
GTTGAGAGAG TAGGTGTTAG ATCAACACGC CTAAGAAGTA TTAACGGAGA AGCAATAGTA
ATGAGCAATA GCCGACTAAC AAATGGAGTA ATCTCAAATT ATGCTGAGAT GAAAAAAAGA
AGACTGGTTC ATAAATTAGG TGTGGTCTAT GAAACTACAT ATGATCAAAC AAAAAGCATA
CCTATGATGA TAAAAAATAT TGTTGATAAA ACTGAAAATG CGATCTTCGA CCGATGTCAT
TTTATCGAAT TCTCAAATAG CAGTCTTGAT TTTGAACTAG TCTATTACAT CCCTACAAGT
GATTATCTTC TAGCAATGTC AGCTCAGCAA GAAATTAATC TAGAGATCAT GAAGAAATTC
CAAAATGAAA ATATTAACTT CGCATATCCA ACCCAAACAA TTCATATAAA TAAATAA
 
Protein sequence
MDDFYKNIII SLLTFSVGCI ISLVSSKILK KVLRRITSAT QSKTDDYIAI LLIETIKPLG 
FILSFIVAWK VLLIGGIVDK TLIGISKFLC LIYIVRFINR VFLKIIQRWA SKINDQSISE
MIRSLSPMVG ASVWSLGVIF YLQNMGVQMA AIWALLSAGG IGAGLALKEP VQEFFEYITI
LLDKPFQSGQ FIHIDGIWAK VERVGVRSTR LRSINGEAIV MSNSRLTNGV ISNYAEMKKR
RLVHKLGVVY ETTYDQTKSI PMMIKNIVDK TENAIFDRCH FIEFSNSSLD FELVYYIPTS
DYLLAMSAQQ EINLEIMKKF QNENINFAYP TQTIHINK