Gene Tfu_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_3116 
Symbol 
ID3580134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp3640983 
End bp3641426 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID637686853 
Productribonuclease P protein 
Protein accessionYP_291172 
Protein GI72163515 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0594] RNase P protein component 
TIGRFAM ID[TIGR00188] ribonuclease P protein component, eubacterial 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00000000134216 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCTC CACGCAACCG CATGCGGCGT CGCGCCGATT TCGACACCGC CCTGCGTCAC 
GGGCGGCGGG CCGGCCGGAA CGCTCTCAGC GTCGCTCTCT TCGTTCCGCA GGACACTCCA 
GACCAGCCAG GTGGAGACGC ACCTCCTCGC GTCGGGTTCA GCGTCAGCAA GGCGGTGGGG 
AAAGCCGTCG TCCGCAAACG GGTCCAGCGG CGGCTGCGTC ACCTCATGCG GGAGCGGGTC 
GGCTCCCTCC CCGCAGGTAG CCTGCTAGTG GTACGGGCTA AACCCCAAGC CGCGCTTCTC 
GACTACAGCG AACTGGCCGC CCAGTTGGAC AGTGCGCTGC GCGCGGTGAC CCGCCCCCGC 
GGACAGTCGT CACACCGTAC CCGCGCTTCG CGCGAGGCCA CGTCCGCACA CACCACGGCA 
GTGGGAGAAC AGCCGACCCA ATGA
 
Protein sequence
MLSPRNRMRR RADFDTALRH GRRAGRNALS VALFVPQDTP DQPGGDAPPR VGFSVSKAVG 
KAVVRKRVQR RLRHLMRERV GSLPAGSLLV VRAKPQAALL DYSELAAQLD SALRAVTRPR 
GQSSHRTRAS REATSAHTTA VGEQPTQ