Gene Tfu_2614 details

Gene Information

• Locus tag: Tfu_2614
• Symbol: rplM
• ID: 3581220
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 3088051
• End bp: 3088500
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637686333
• Product: 50S ribosomal protein L13
• Protein accession: YP_290670
• Protein GI: 72163013
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 0.784186
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCACAT TCAGCCCCAA GCCCAGCGAT ATTCAGCGTC AGTGGCACGT CATCGACGCC 
TCCGATGTCG TGCTCGGCAG GCTGGCTAGT CGCGTTGCCA CGCTGTTGCG CGGCAAGCAC 
AAGCCGTACT ACGCGCCCCA CGTCGACACC GGTGACTACG TGATCGTCGT GAACGCCGAC 
AAGGTGGTGC TGACCGGTAA GAAGCTGGAG CAGAAGCGGG CCTACCGTCA CTCCGGCTAC 
CCCGGCGGCC TGCGTTCCAT TCCCTACAGC GAACTGATGG CGAAGAACCC GGCACGCGCT 
GTAGAGAAGG CGGTCAAGGG CATGTTGCCG AAGAACTCTC TCGGCCGTCG GATGGCGAAG 
AAGCTCAAGG TGTACGCCGG GCCGGAGCAC CCGCACCAGG CCCAGAAGCC GGTGCCGTAC 
GAGATCACCA AGATCAAGCA GCCCGCGTAG 

 

Protein sequence

MRTFSPKPSD IQRQWHVIDA SDVVLGRLAS RVATLLRGKH KPYYAPHVDT GDYVIVVNAD 
KVVLTGKKLE QKRAYRHSGY PGGLRSIPYS ELMAKNPARA VEKAVKGMLP KNSLGRRMAK 
KLKVYAGPEH PHQAQKPVPY EITKIKQPA