Gene Tfu_2173 details

Gene Information

• Locus tag: Tfu_2173
• ID: 3580394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 2548253
• End bp: 2550241
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637685878
• Product: cell wall biosynthesis glycosyltransferase
• Protein accession: YP_290229
• Protein GI: 72162572
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0463] Glycosyltransferases involved in cell wall biogenesis

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCATCG ATGTGACCGT CATCATTCCG GTCCACAACA CCGGCCGGGG GGTACTAGCT 
GGGCTTGAAT CGCTGCGCGC GCAGACTCTG CCCCGCTCTC GCTTCGAAGT CATCTACGTC 
GACGACGGTT CCACTGACGG GACCGGGGAG CTGCTCGACA CGGAACTCGC TGGCGAAGAG 
AACTTCTCGG TCGTGCACAT CGAGAACTCC GGCTGGCCTG GACGCCCCCG CAACATCGGC 
ATCGACCGCG CCCGAGGCGA GTACCTCTTC TTCATGGACG ATGACGACTA CCTCGGCGCG 
GAAGCCTTAG AGCGCCTGGT CGCCAAAGCC CGGGAGGACT CCGCTGACAT CGTGATCGGC 
CGGATGGCGG GCATCGGCCG GAGAGCGCCC CGGGAGATCT TCCAAAGACC CTTGTCCGGG 
GCGACACTGC GCACCCACCG CATCCTGCTC ACCACGCTGA CGGTGCACAA GCTCTTCCGC 
ACCGAGTTCG TCCGCTCCCA CGGGCTGCGC TTCCCCGAAG GGAAAGTCCG GCTCGAGGAC 
CACATGTTCA TGCTCCCCGC CTACCTGCGC GCCGCCTCGG TCTCGGTAGT CCACGACTAC 
ACCTGCTACT ACTGGGTGCG GCACAAGGAC GAAAACTTCG GGAATATCTC GTTCCGCACC 
CCTCCCGACC CCGAGGACTA CCTCGGCAGT GTCGAGCGGA TCATCGACAT CATCGAAGCC 
GAAACCGAAC CGGGAGAGTT CCGCGACACC CTGCTGGCGC AGTGGTACCG GTCGAAACTG 
CTAGGGCAGA TGCAAGGGGC TAAATACTTG CGGCTGCCCG AGCAGACCGC GGAGGTCCTC 
CACACCGTCG CCCACTCGCT CGTCCAACGC CGCATCCCCG AACGGGTGGA CGCCAGACTC 
AACCCGTTCT CCCGGCTGCG CGCTACCGCG CTGCGGACCG GACAGTTCGA CCTTGTCCGC 
CACGTCGCCG AGTTCGAACA CGACCTGGGA CAGCACACCA CGGTGACCGG ATACCGGTGG 
GACGGCTCGG TGCTGTACGT GGACGTGGAG AGCACCCTGG TGCGCAAAAG CGACCAGCGG 
CCCCTGGAAT TCGTGCGCTC CGCCGAATCG GTCTACTGGG ACCTCCCGAC CGCCGTGCTC 
TCCCACCCGG AGGTGTGCGA GGCCGCCGAG GTCACCGCGG CGCTGAAACG GATCAAGCTG 
CGTACCTTCG CCCGCAATAA GAAGCTCGGC GCAGATGTCA CCGTGCCGAC CTCGTTCACC 
CTCCTCGAAG AACCGGTGGG TGCGGACCGG TTCACGGTCC GGCTGGTCGG GACGGTCACG 
CTTGACATCC AGCGCGGCAA CCTGGGCGGC CCCCTGCTCG GCAAGTGGTG GTTCGTCTCC 
CGCATCGACT TGGGCGGCGT GAGCTGCGAT TTCACGCTTG GTCCGCTGCG CTCCCCCGCA 
GCGGAGGCCA CGCGGGTCCC CGCCTTCGTC CACCTCGACA ACACACCCCC GGTGCTGGTG 
ACCCCCAGCT ACAACGCGAA GAACCACCTG GTGGTCACCG CCGACGACCC CTGGCAGAAA 
CTCCCGGCGC TCATCCCCCC GCAGGAGCGC CCGGCTGTGG TCCGCAACAG CGACGGCCTG 
CAATTGCGGA TCCCGCTGGC CCTGCACACC AGCGACGAGC GCATCGGGTT GCCGCTGTGC 
TTGGTCGGCA ACGGGGAGAA GGTAGAGAGC GCGGCAAGTG TGCGGCCCGA TTCGGCCAGC 
GCGACCAACC CGCACTCCGT CCTCACCGCT GACGTGCCCC ACGTCTCCGG TCCGGGGCAG 
TGGGAACTCG TCGTGGAGAC GGCGGAGCGT CCCATCCCGC TGCGGCTCCG GCTCAGCCGG 
GGCCTGTTCC ACTGGTCGGT CAAGGTGCAG CACCCGTCCC GGTCGTTGCG TGCCCGGATG 
GGCCGCCTCT ACCGGGCGCT CCGGCGCCGG GCAGGCCGCC TAGCCCGTGA TCTCGGCCTC 
CGCCGCTGA 

 

Protein sequence

MSIDVTVIIP VHNTGRGVLA GLESLRAQTL PRSRFEVIYV DDGSTDGTGE LLDTELAGEE 
NFSVVHIENS GWPGRPRNIG IDRARGEYLF FMDDDDYLGA EALERLVAKA REDSADIVIG 
RMAGIGRRAP REIFQRPLSG ATLRTHRILL TTLTVHKLFR TEFVRSHGLR FPEGKVRLED 
HMFMLPAYLR AASVSVVHDY TCYYWVRHKD ENFGNISFRT PPDPEDYLGS VERIIDIIEA 
ETEPGEFRDT LLAQWYRSKL LGQMQGAKYL RLPEQTAEVL HTVAHSLVQR RIPERVDARL 
NPFSRLRATA LRTGQFDLVR HVAEFEHDLG QHTTVTGYRW DGSVLYVDVE STLVRKSDQR 
PLEFVRSAES VYWDLPTAVL SHPEVCEAAE VTAALKRIKL RTFARNKKLG ADVTVPTSFT 
LLEEPVGADR FTVRLVGTVT LDIQRGNLGG PLLGKWWFVS RIDLGGVSCD FTLGPLRSPA 
AEATRVPAFV HLDNTPPVLV TPSYNAKNHL VVTADDPWQK LPALIPPQER PAVVRNSDGL 
QLRIPLALHT SDERIGLPLC LVGNGEKVES AASVRPDSAS ATNPHSVLTA DVPHVSGPGQ 
WELVVETAER PIPLRLRLSR GLFHWSVKVQ HPSRSLRARM GRLYRALRRR AGRLARDLGL 
RR